Pectobacterium brasiliense: B5S52_11955
Help
Entry
B5S52_11955 CDS
T06364
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbra03016
]
B5S52_11955
Enzymes [BR:
pbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B5S52_11955
Transfer RNA biogenesis [BR:
pbra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B5S52_11955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARA76553
LinkDB
All DBs
Position
complement(2627292..2628416)
Genome browser
AA seq
374 aa
AA seq
DB search
MNYQLITSDIGLQQVCSQARRFPQVALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPSTI
TDWAPFQALLRDEQVTKFLHAGSEDLEVFLNAFGTLPTPFIDTQILAAFLGKPLSYGFAA
LVADYMGVTLDKSESRTDWLARPLSEKQCDYAAADVFYLLPMAIQLVADTEAAGWMNAAL
DECLLLCQRKQDILAPALAYREFGNAWQLRGRHLACLQRLAEWRLRKARERDSAVNFVVR
EENLLQVARCLPTSLGELSSLGLSGPEIRYHGKTLLDCVAQTEGLADADCPPPVINLIDY
PGYKKAFKDIKALVQRVSEQSGLSAELLASRRQINRLLNWHWKLSGQDAGMPEMLSGWRG
QLYGDELREIVQGY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacttccgacatcgggttacaacaggtttgctcccaggcgcga
cgctttccgcaggtggcattggacacggagttcgtcagaacccgcacgtattacccgcaa
ttagggttgattcaattgtatgacggcgaacagctttcacttatcgacccgtcaacgatt
accgactgggcaccctttcaggcattactgcgtgacgaacaggtcactaaattcctgcat
gcgggcagcgaagatctggaagtgtttctcaatgcgtttggcacgctgccgacgcctttc
atcgatacacagattctggccgcatttttaggcaagccgctttcttatggatttgctgcg
ctggtggccgactacatgggcgtgacgctggataaaagcgagtcgagaacggactggctt
gctcgtccgctgagcgaaaaacagtgcgattacgctgccgctgatgtgttctatctgctg
ccgatggccattcaactggtggcggatacggaagcagcagggtggatgaacgcggcgctg
gatgagtgtctcctgctgtgtcagcgtaaacaggatattttggcaccggcgctggcctat
cgcgaatttggcaacgcctggcagctgcgcggccgacatctggcttgccttcagcgtctg
gctgagtggcgcttgcgtaaagcgcgtgagcgagacagcgcggtgaattttgtcgtacgt
gaagagaacctgttgcaggtggcgcgttgtctgccgacgtcgctgggtgaactgagctcg
ctggggctgagcggcccggaaatccgctatcacggcaaaacgctgctggactgtgttgca
cagacggagggccttgctgatgcggattgtccaccgccggtgattaatttgatcgactat
cccggctataaaaaagcgtttaaagatatcaaagcgctggtgcagcgtgtgagcgaacag
agtggattatccgccgagctattggcttcacgtcgccaaattaatcgtctgctgaactgg
cactggaaattaagcgggcaagatgcaggaatgccggaaatgttgtctggctggcgcggt
cagttatatggcgatgaactgcgtgaaattgtgcagggttattaa
DBGET
integrated database retrieval system
