Pectobacterium brasiliense: B5S52_12565
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Entry
B5S52_12565 CDS
T06364
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5S52_12565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbra03400
]
B5S52_12565
Enzymes [BR:
pbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5S52_12565
DNA repair and recombination proteins [BR:
pbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5S52_12565
RecFOR pathway proteins
B5S52_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
TIP49
AAA_14
nSTAND3
Rad17
AAA_2
AAA_18
AAA_17
NTPase_1
RNA_helicase
Bac_DnaA
AAA_24
AAA_28
TsaE
NB-ARC
ABC_tran
NPHP3_N
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ARA76667
LinkDB
All DBs
Position
complement(2775450..2776460)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLISADAVPEEEFIDRAIRPKLLNEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYKVEDLQYIVSRSAQCLGLDLTSEGALEVARRARGTPRIANRLLRRVRDFSEVKSEG
AITGDVATQALDMLAVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREDLN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttaatctccgctgacgccgttcccgaagaagaatttatcgac
cgtgcgatccgccctaaattgctcaacgagtatgtggggcagccgcaggtgcgtgagcag
atggaaatttttattcaggcggcccgtaaacgcggggatgcgctggaccatctgctcatt
tttggtcctcccggtctggggaaaacgacgctggcgaatattgtcgctaatgaaatgggc
gtgaatatgcgcacgacgtcgggcccggtgctggaaaaagccggcgatctcgccgcgctg
ctgactaatctcgaaccgcatgatgtactgttcatcgatgaaatccatcgcctgtcgccc
gttgtggaagaagtgctgtatccggcgatggaagactatcagttggatatcatgatcggc
gaagggccggccgcccgttcgatcaaactcgatttgccgcctttcacgctggttggtgca
acaacgcgtgctggctcgttaacctcgccgctgcgtgatcgtttcggcattgtgcagcgc
ctggagttttataaagttgaggatttgcagtatatcgtcagccgcagcgcacagtgtcta
gggctggatctgacatccgagggcgcgcttgaagtggcgcggcgcgcgcggggaacgccg
cgtattgccaaccgactattaagacgggtgcgcgatttctccgaagttaaatcggaaggg
gcgattaccggtgatgtggcgacgcaggcgctggatatgctggcggtggatagcgaaggt
tttgactacatggaccgtaagctgctgttggcgatcatcgataaatttatgggtggtccc
gttgggctggacaatttagcggcagcgattggcgaagagcgtgaaaccattgaagacgtg
ctggagccgtttctgattcagcaagggttcattcagcgtacgccgcgcggtcgaatggcg
acgcaacatgcctatcgtcattttggcttaacgcgtgaagatttaaattaa
DBGET
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