Pectobacterium brasiliense: B5S52_13010
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Entry
B5S52_13010 CDS
T06364
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbra03032
]
B5S52_13010
03036 Chromosome and associated proteins [BR:
pbra03036
]
B5S52_13010
03400 DNA repair and recombination proteins [BR:
pbra03400
]
B5S52_13010
DNA replication proteins [BR:
pbra03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B5S52_13010
Chromosome and associated proteins [BR:
pbra03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
B5S52_13010
DNA repair and recombination proteins [BR:
pbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
B5S52_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ARA76749
LinkDB
All DBs
Position
complement(2878682..2878966)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHIPAKVVEDAVKEMLEQMASTLAEGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaaggcttgctggacagcaatctcatatcccagccaaa
gtggttgaggatgcagtgaaagaaatgctcgaacaaatggcttctacgctagccgaaggc
gaccgtattgaaatccgtgggtttggcagtttttcacttcactaccgtgcaccgcgtgta
ggtcgtaatccgaaaacgggtgacaaagttgagctggaaggtaagtacgtccctcacttt
aaaccgggcaaggaactccgcgaccgcgctaatatttacggctaa
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