Pectobacterium brasiliense: B5S52_16485
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Entry
B5S52_16485 CDS
T06364
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbra03400
]
B5S52_16485
DNA repair and recombination proteins [BR:
pbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5S52_16485
Archaeal homologous recombinant proteins
B5S52_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
cobW
Baculo_PEP_C
AAA_21
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARA77396
LinkDB
All DBs
Position
3677197..3680880
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALSTLQARASGIQLLTDDQRQQVEEQLAELIQQEQRGNIERE
QALTTLRWFEQLTQQHTQKTNTQAQHASAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQESLTLAQHIEQLTGKQAAEQVTLTALRQQEEKAERDVSEHKRVRQQQEQVINEQVV
PLDHRIATLEQQKAQQQDELTKTQARLHADESKQTQTAAEQQQAKQQLEQIQSYRQQHAH
HQQWGEQLPLWRTQFRQLRQLQDEQEKLKQKQVQHTAQSAVLQQETLTLAAQQREQQAVV
DAARQQFMQHDETRQQQEAHQPLSVLQQQFNQRIDQRAERQRLATISDQFQRLHVRKQQY
LAKQDEVQGHISQSEILKKQQQSEHEQRSQHLVDLETVYRQEERIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQQRLTALQQDVNQLTTALANTTAQLASLAQQRELLQQ
EIAQIDSEHHVLQQQWQDVSERLQVNYTLEQPDEIAAWLAQNEVEEQAIRQQITAREQLQ
KQWQESKDLLTAAEALQRELDQKIALNTQQQASLSITQQEIDQSLQNVHQQITQHTQEIT
QTLATLNLPLPAADAQNDWLAQRENEWQDWKTKEQEQSRLVPLLATLESDLQHLNRSVAE
AKQLFQTQQQHLEQHLALLSASQQERLALFGDRQIATVREQLQRTSQQYDDALRLALSAR
QQTETTLSRLTGELASTQQQYEQSTRQHESAIERFTQALQQSTFADETTFLNALLNEQER
QTLQTWKEELYQRLQQAAALHQQAERELLAHQQKRPASLTEDATQEAVQQQLTALDETLK
TNLRQQGEFQRQLADDKQQRQNQQDLLNEIAQSQQMYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKINGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcagtctacgcttaaaaaaccttaatgcgttgaaaggcgaatggaagatc
gatttcacgcaggagccattttccagcaacggcttatttgccattaccggcccgaccggc
gcggggaaaaccacgctgctggatgcgatctgtctggcgctgtaccacgaaacgccacgg
cttggcctgctttccgccagccagaatgacctgatgacgcgtaacaccgctgagtgcctt
gccgaagtcgagtttgaagttaaaggcgtcggatatcgcgccttctggagccagcgtcgg
gcaagaaacgccccagacggtaacttgcagtctcccaaggccgaactcgcgctcattgaa
gacggcaagattctgtgtgaaaagctcaatgataagaaagagatgatcacgcagctcacc
gggctggattttggccgcttcacgcgatccatgatgctgtcacaaggccagttcgccgcc
ttcctcaatgccaaagcagacgaccgagcagaactgctggaagagctgaccggcacggac
atttacggcctgatttccgaacgcgtctatgacaagcacaagcaggcaaacgtcgcactg
agcacgttacaggcacgtgcatcaggcattcagcttttaaccgacgaccagcgtcagcag
gtggaagaacagcttgccgagttgatccagcaagagcaacggggcaacatcgaacgtgag
caagcgctgactacgctgcgctggtttgagcaactcacgcagcagcacacgcagaaaacc
aatacgcaggcgcaacatgcaagcgccgaatccgccattcagcaggctaaaccgcagctc
gacaggttaactcacagcgaaccggcagaaaaactgaggccgctacatcaggaacgagag
cgctaccgacaggaatctctcacgctggcacagcatattgagcaactgaccgggaagcag
gccgccgaacaggtgacgttaaccgcgctacgccagcaggaagaaaaagcagagcgggat
gtgagtgagcacaaacgtgtacggcagcagcaagagcaggtgatcaacgaacaggttgtg
ccacttgaccatcgcattgccacgctggagcagcaaaaagcgcagcaacaggacgaactg
acaaaaacgcaggctcgtctgcacgccgatgaaagcaaacaaacccagacggcagcggaa
cagcagcaggctaaacagcagcttgaacagatccagtcttaccgccagcaacacgcgcat
catcagcagtggggagaacaacttcctctgtggcgcacccagtttcgacaattgcgccaa
cttcaggacgagcaagagaagctgaagcaaaaacaggtgcagcacaccgcacaatcggca
gtgctacagcaagagactctgactctggcggcacagcagcgtgaacaacaagcggtcgtt
gatgcagcccgtcagcagttcatgcaacacgatgagacacggcaacagcaggaagcgcac
cagccgctttccgtcctgcaacagcagtttaatcaacgcattgaccagcgcgctgaacgc
caacggctcgcgacaatcagcgaccagttccagcgtctgcatgttcgcaagcaacagtac
ctcgccaaacaggatgaggtacaagggcatatcagccagtcagaaatcttaaagaaacag
cagcaatccgagcatgagcagcgcagccagcatctggtcgatctggaaacggtgtatcgg
caggaagagcgtatcgttaagctggaagccgaacgtcagcggctacaggctggagaagcg
tgcccgctatgtggttcaaccgagcatcccgctatcgaacgctatcaggcgctgcaaccg
tctgaaacccagcagcgcctgacggcgctacagcaggacgtgaaccagttaacgacagcg
ctggcgaatacgaccgcacagttggcctcgctagcgcaacagcgggaattgttgcagcag
gagatcgctcagatcgatagcgaacatcacgtcctgcagcaacagtggcaagatgtcagt
gagcgcttacaagttaactacacgttggaacagccagatgagatcgcggcctggcttgcg
caaaatgaagttgaagaacaggctattcgacagcagattaccgcacgcgagcaattgcaa
aaacagtggcaggaaagtaaggatttactgactgccgcagaggcattgcagcgggaactc
gaccagaaaatcgcgctgaatacccagcagcaagcctcgctaagcattacgcagcaagaa
atcgatcaatcgctgcaaaacgtgcatcagcagatcacgcagcatacgcaggaaatcacg
cagacgctggcaaccttaaaccttcctctgccagcggccgatgcccagaatgactggctg
gctcagcgtgagaacgagtggcaagactggaaaaccaaagagcaggagcaatctcgctta
gttcctctattagccacgctggaaagcgatcttcagcatctgaatcgcagcgtggccgag
gcaaaacagctgttccaaacgcagcaacagcacctggaacagcacctcgcgttactcagc
gcgagccaacaagagcggctggcgttgtttggggacaggcagatcgctaccgtgcgcgaa
cagctacagcgaaccagccagcagtacgacgatgcactcagactagccctgtcagctcgt
cagcaaaccgaaacgacgttgagccgtctgacgggagagctggctagcacgcaacagcag
tatgaacagagcacacgccagcatgagagtgcgatcgaacgctttactcaggcgttgcag
caaagcactttcgccgatgaaaccacgttcctcaatgcgctgcttaatgagcaggaacgc
cagacgttgcagacgtggaaggaagaactgtatcagcgtttgcagcaggcggcggcactt
caccagcaggctgaacgtgagctgctcgcccatcaacaaaagcgccccgcttccctgacg
gaagacgccacacaagaagcggtacagcagcagttgacagcgctggatgaaacgctgaaa
accaacctgaggcaacaaggcgagttccagcgtcagttggctgacgataaacaacagcgt
cagaatcagcaggatttactcaatgagatcgcccaaagtcagcaaatgtatgacgactgg
agctgtcttaatacgctcatcggctcacaaagcgggcataaatttcgtaagtttgctcag
gggctaacgttggaccatctggtttatctcgccaatctccagctttcccgcctgcacggg
cgctatatgctgaaacgtaaacccggtgacgatctggaactgctggtgatggatacctgg
caagcggacgccgagcgtgatacgcgcacgctgtccggcggcgagagcttcttagtgagt
ttgtcgctggcgctggcgctctccgatttggtcagccacaaagccagcatcgactcgctg
tttctggatgaaggcttcggcacgctggatgccgagacgttggatatcgcactggatgct
ctcgataacctgaacgcctccggtaaaaccatcggcgtcattagtcatgtcgaagccatg
aaagagcgtattccggtacagatcaaagtgcagaagattaacgggctgggcgtcagccgg
ctggcgccgcagtacgccgtttaa
DBGET
integrated database retrieval system