Pectobacterium brasiliense: B5S52_16555
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Entry
B5S52_16555 CDS
T06364
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B5S52_16555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbra02000
]
B5S52_16555
02044 Secretion system [BR:
pbra02044
]
B5S52_16555
Transporters [BR:
pbra02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
B5S52_16555
Secretion system [BR:
pbra02044
]
Type I secretion system
Adhesin protein transporter
B5S52_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_22
CLP1_P
Peptidase_C39
RsgA_GTPase
SMC_N
AAA_18
AAA_29
DUF87
MMR_HSR1
TsaE
ATP-synt_ab
cobW
AAA_10
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARA77410
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All DBs
Position
3711003..3713141
Genome browser
AA seq
712 aa
AA seq
DB search
MTQATKTEIWIAAMARAAAHYGQVVDIQSIRQQMRWYEQQPIARQLEQISHLMGLSISLR
HTEKLRWRNKILPVLAETDDGGVIVIESLNEEGIATYWLNDGGDLQREAELTELIKHSQG
IIVLVGIAERGRDTRIDDFVKPYRKHWFWQHFRGAKRQIGEISLASIVGNVLALAGILFS
MQVYDRVIPAQSIPTLWVLFFGVLLAAALEYAIRLSRTIVSDLMGKSIDLNVSGMLFARA
LAIKNEARPKSTGSFISQLREIDQVRELLTSTTVGAAADMPFVLLFLGIMAMIGGPLVFI
PMLAIPLIVIPGLLLQWPMAKLAKEGMRESALRNAVLVESIEGIEDIKALQAEPYFQRQW
EQTHEVSAAIGMKQRVWGARLSGWASTVQQLTYAGMLVFGCYLVMAGDITTGTLVACSLL
SSRTIAPLMQLTMVFSRWQHAKTAMTGLDDLLQKPLDRPEDGKMAHCPILQGHFQLHNVQ
YSYDPEKGDTALQVGKLEIKPGEKVALLGKVGAGKSTLLKLLANQATATRGKVIIDGVDI
SQIDPADVRRQLGFLSQESRLFFGSLRQNLMLGNPHATEQELLQALRISGALSLIQQDAS
SLDRIIHEGGRGLSGGQRQMILLSRMLLRNPQIVLLDEPTASMDEQLESHVIHQLSSWLT
GRTLVLVTHRPALLKLVDRVVVMDGGRIVADGPRDQILKAVSKPADTAQSVA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagcaacgaaaacggagatctggattgccgccatggctcgcgccgccgcccac
tatgggcaggtggtcgatatccagtcgatacgccagcagatgcgctggtacgaacagcag
ccgattgcccgccagttagaacaaatcagccacctgatggggttgagcatcagcctgcgc
cacacggagaaactccgctggcgcaacaagatcttaccggtactggcggaaaccgatgac
ggcggcgtgatcgtcatcgaatcattgaatgaggaaggcatcgccacctactggctgaat
gacggcggcgacctgcaacgcgaagccgaactgacagaactcatcaaacacagtcagggg
attatcgtgctggtcggcatcgcggaacgtggccgcgatacccgcatcgatgatttcgtc
aaaccatatcgcaagcactggttctggcagcactttcgcggcgcaaaacgacagatcggg
gaaatttctctcgcgtctatcgtaggtaacgttctggctctggcggggattctgttctcc
atgcaggtgtatgaccgcgtgattccggcgcagtcgatccccacgctgtgggtgctgttt
ttcggcgtgctgctggccgccgcattagagtatgccatccgtttatcacgcaccatcgtc
tccgatctgatgggaaaaagcatcgatctgaacgtgtccgggatgctgtttgcccgcgcg
ctggcgataaaaaatgaggctcgaccgaaatctaccggctcgtttatttcacagctgcga
gaaattgatcaggtgcgtgagctgctgacctcgacgaccgtcggggccgccgccgatatg
ccgttcgttttgctgtttctcggcatcatggcgatgatcggcggtccgctggtgtttatt
cccatgctggcaatcccgctgattgtgatccccggcctgctgctgcaatggccgatggcg
aagctcgccaaagaagggatgcgtgaaagcgcattgcgcaatgcggtgttggtcgaatcc
attgaagggatcgaagatattaaagcgttgcaggccgaaccctacttccagcgccagtgg
gaacaaactcacgaagtcagcgccgccatcggcatgaagcagcgcgtatggggcgcacgg
ctcagcggctgggcatcgaccgttcaacagctcacctacgctggcatgctggtcttcggc
tgctatctggtgatggcgggcgatatcaccaccggtacgctcgtggcctgtagcctgctt
tcctcccgcaccatcgccccgctcatgcagctaacaatggtattttcccgctggcagcat
gcgaaaaccgccatgaccgggctggatgacctcctgcaaaaaccgctggatcggccggaa
gacggcaaaatggcgcactgtccgatccttcaaggacacttccaactgcacaacgtgcaa
tacagctacgatcccgaaaagggcgataccgccttgcaggtcggcaagctggagatcaaa
ccgggcgaaaaagtggcgctgctcggtaaggtcggtgcggggaaatccacgctgctcaag
ctgcttgccaatcaggccaccgcgacgcgcggcaaggtcattattgatggcgttgatatc
agccagatcgatccggccgatgtccgccgccagttgggttttctgtcacaggaatcgcgc
ctgttcttcggcagcctgcggcaaaacctgatgctcggcaacccgcacgccaccgagcag
gaactgttgcaggcgctgcgtattagcggcgcgctcagcctgatccaacaggatgcttcc
agtctggatcgcattattcatgaaggcgggcgcggtttatccggcgggcagcggcagatg
atcctgctcagcaggatgctgctacgtaatccccagatcgtgctgctggatgaacccacc
gcgtcgatggatgaacagctggaaagccacgttatccaccaattaagcagctggctcacg
ggccgcacgctggtactggtgacacaccgtccggcgctgctcaagctggttgatcgcgtc
gtcgtcatggatggcggtcgcatcgtggcagatggcccacgcgatcagatcctgaaagcg
gtcagcaaaccggcagataccgcacagagcgtggcgtaa
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