Pectobacterium brasiliense: B5S52_16740
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Entry
B5S52_16740 CDS
T06364
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra03030
DNA replication
pbra03430
Mismatch repair
pbra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5S52_16740
03430 Mismatch repair
B5S52_16740
03440 Homologous recombination
B5S52_16740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbra03032
]
B5S52_16740
03400 DNA repair and recombination proteins [BR:
pbra03400
]
B5S52_16740
Enzymes [BR:
pbra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5S52_16740
DNA replication proteins [BR:
pbra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5S52_16740
DNA repair and recombination proteins [BR:
pbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5S52_16740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ARA77445
LinkDB
All DBs
Position
complement(3749096..3752578)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADFCVESDELGDELAHLTVLAMNNAGYQNLTLLISHAYQRGYGAAGPTIDRDW
LVEHQEGLILLSGGRRGDVGRFLLRGNQTQAEQCLAFYQEHFPQRYYLELIRTSRPDEES
YLHAAVELATKHGVPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVQCSKKGL
EERLEFLFPDPEVRAERRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDKVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINARRAKQGQEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVNGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLPDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD
ALLNELRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggccaaagtcggtccgctggtaaaaaaagcggcggcactcggcatgccagcgctggcg
attactgattttaccaacctgtgtgggctggttaaattctatggcggcgcgcatggcgcg
ggaatcaagcccattatcggcgcagatttctgtgtcgaaagcgacgaattgggggatgag
ctcgcgcatcttaccgtcctggccatgaataatgctggctaccagaatcttacgctgctg
atttcccacgcttatcaacgaggctatggcgctgccgggccgacgattgaccgggattgg
cttgttgaacatcaggaagggctgattttactgtctggcggccgccggggtgatgtcggt
cggtttttgctgcgtggtaaccagacgcaggccgaacagtgtctggctttttatcaggaa
cacttcccccagcgttactatctggaactgattcgcacgtcccgccccgatgaagaaagc
tatttgcacgccgccgtcgaactggcgacgaagcacggggtgcccgtggtggcaaccaat
gaagtgtgttttatcagcaccgatgattttgacgctcacgaaatccgcgtggccattcac
gatggctacacgcttgacgatcccaagcgtccacgtaattacagcccacagcagtacatg
cgttccgaagaagaaatgtgcgagctgttcgcggatatccccgaagcgctggcgaacagc
gttgaaattgccaagcgttgtaacgtaacgattcgtttgggtgaatatttcctgccgcag
ttcccaacgggcgacatgagtacggaagactttctggttcagtgctcgaaaaaggggctg
gaggagcgtctcgaattcctgttccccgatccggaagtgcgcgctgagcgtcggcctgaa
tatgatgaacgtctggatattgaactgggcgttatcaaccagatggggttccccggctac
ttcctgatcgtaatggaatttattcagtggtcgaaggataacgatgtacctgttggaccg
ggacgtggttccggtgcgggttcgttagtggcctatgcgctgaaaatcaccgatctggat
ccgctggaattcgacctgctgtttgaacgttttctcaatcctgaacgtgtttccatgcct
gactttgacgtcgatttctgtatggaaaaacgcgacaaggtcatcgatcacgtcgcggaa
atgtacgggcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcg
gttattcgtgacgtagggcgcgtgcttgggcacccttatgggtttgtcgatcgtatttca
aagctggtgccgcccgatccgggcatgacgctggaaaaagcgtttgctgctgaaccgcaa
ctgccggaaatttatgaagccgatgaggaagttaaggctctcatcgatatggcgcgtaag
ctcgaaggggtaacgcgtaacgcgggtaaacatgcgggtggggtggtgatatcccccacc
aagattaccgatttcgcgccgctgtattgcgatgcggaaggcaaccatccggttacccag
ttcgataagaacgacgtggaatatgccgggctggtgaagttcgacttccttggcctgcgt
acgttgaccatcatcgactgggcgctggggatgattaacgcccgtcgcgcgaagcaaggg
caggagccgattgatattgcggcgattccgctcgacgataagaaaagcttcgacatgctg
caacgctcggaaaccacagcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aaacgccttaagcccgactgctttgaagatatgatcgcactggtggcgttgttccgcccc
ggcccgttgcaatccggcatggtagataacttcatcgaccgtaagcacggtcgtgaagcg
atctcgtatcctgatatcgaatggcagcacgagtcactcaagccggtgctggagccgacc
tacggcattattctgtatcaggaacaggtcatgcagattgcgcaggttctggcgggctat
acgctgggcggcgcggatatgctgcgtcgtgcgatggggaaaaagaacccggtcgaaatg
gcgaagcagcgtggtggcttcgaagatggtgccaaatctcgcggcgtgaacggcgaactg
gcggttaagattttcgacctggtggaaaaattcgccggttatggctttaataaatctcac
tccgcggcctatgcgctggtgtcttaccaaacgctatggctgaaggcacactatccggca
gaattcatggcggccgtaatgacggccgatatggacaacacggataaagtggtcggtctg
gttgacgaatgttggcggatggggttaaaaatcctgcctcccgacatcaacagcgggctg
tatcacttccacgttaacgacgatggcgagattgtttacggcatcggtgcgattaaaggc
gtgggtgaaggccctattgaggcgattatcgaagcgcgtaatcagggtggctattttaga
gagctgtttgatctctgcgcgcgtaccgacattaaaaagctgaaccgccgcgtgctggaa
aagctgattatgtccggggcgtttgaccgtctggggccgcatcgtgccgcgttgatgaat
tcattgcctgatgcgctgaaggctgccgatcagcatgcgaaagcggaagcgattggtcag
gtggatatgttcggcgtgctggccgatgcgcctgaacaggttgagcaatcctacagcacg
gtgccgccgtggccggagcaggtggtgctggatggtgaacgggaaacgttggggctgtac
ctgaccggccacccgatcacgcaatatattaaggaaatcgaacgctatgccggtggcgta
cgtttgaaagatatgcacccgacggatcggggtaaaatgaccactgccgttgggctggta
ttggcggcccgcgtcatggtcaccaagcggggtaaccgtattggtgtctgtacattggac
gatcgttccggtcgccttgagataatgctgtttaccgatgcattggaaaaatatcagcat
ttacttgagaaagaccgtatccttatcgccagtggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgtccgagagttaatggatatcagtgaagcgcgggaaaaatac
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaaccccatcgatcggggacgatcccagtgcatctctattaccag
cgtgaagatgcgcgcgcccgactacgtttcggtgcagcatggcgtgtaacgcctgccgat
gcactactgaacgagctgcgcacattagtgggtaatgagcaggtggaactggaatttgac
taa
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