Pectobacterium brasiliense: B5S52_16975
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Entry
B5S52_16975 CDS
T06364
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5S52_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbra03400
]
B5S52_16975
Enzymes [BR:
pbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B5S52_16975
DNA repair and recombination proteins [BR:
pbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5S52_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ARA77486
LinkDB
All DBs
Position
complement(3804248..3807646)
Genome browser
AA seq
1132 aa
AA seq
DB search
MFRIYHSNQLDILKRLMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGHFGIAANI
QFPLPGVFLWNMCRHVLPDIPKESAFSKDAMTWKLMHLLPDLLAQPDFAALNHYLQDDDN
QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRELA
QPEWHHAILYQRFITALEQAKTCPKGLPPRVFICGISALPPIYLQALNALARHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARNRRLHRFDGEQTDETRPLFRDPSQAETLFNDDGKQSI
NNPLLASWGKLGRDNLYLLADLDSVQEIDAFVESDGENLLQALQRDILELEDHAVVAVSH
ETQNTSMQKRLLALDDRSIDFHACHSPQREVEVLHDRLLAMMADDPELMPRDVIVMMADI
DSYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSQVGDWQGVLPYDESSGLIAELAGQLAELLMQIHHWRQRLFLPRVLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQYVIGMGTMAHYPQQVPISRLRDELSRRLDQERLSQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQHKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAER
VMKHLCREHSRMPFDANNFLSAPQPLSFAAEWLAAANRKGEAQPDFDREALSARASDRDV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQLNSELLNTLINEG
DTEKLYRRARAAGELPYGAFGEIYWQEQQQEMAQLAARVRDELTPSLSVSREVDILLDGV
RVSGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCATGGQGESRLYGREETAWRFAA
LSEAQAREHLAVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRSDEEAQNKARAR
LLQAWQGNMGMRGEGEDYYLQRIIRELDEKRMNEVIEAAQIWLLPPFRSNLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatctatcactctaatcagttagatatcttgaaaagactgatggttgagctg
ataaaacgtcagccgcttgcggatcccttccagcaggaagtgattttagttcaaagcccg
gggatggcgcagtggctgcaaattgaactggctggacacttcggaattgctgctaatatt
caattcccgctgcccggtgtttttttgtggaatatgtgtcgtcatgtgctgccggatatt
ccaaaagaaagcgccttcagcaaggatgcgatgacgtggaagctcatgcatttgctgccc
gatttgttggctcagcctgattttgcggcccttaaccattacttgcaggatgacgataac
cagcgcaagctgcatcagcttgccggacgcgtagcggatcttttcgatcaatacctgatt
tatcgcccggaatggatcaaggcatggcaagaagggaaacaggttgacgatctcggcggg
aatcagctgtggcagtccgcgctgtggcgcgcgctggtggattacacgcgtgaactggcg
cagcccgaatggcaccatgcgattctgtatcaacgctttattactgcgttagaacaggca
aaaacgtgcccgaagggcctgccgccacgtgtttttatctgcggtatttcggcgttaccc
cccatctatttacaggcgttgaacgcactggcgcgccatattgatgtgcacctgctattt
accaatccctgtcgccattactggagtgacattcaggattataaatttctggcgaagcta
aaagcccgcaaccgccgcttacatcgctttgatggcgaacagactgatgaaacccgcccg
ctctttcgcgatccttcacaggcagaaacgttgttcaacgacgacggtaaacagtcgatt
aataatccgctgctggcatcgtggggaaagctgggacgcgataacctctatctgctggct
gatttggatagcgtgcaggagatcgatgcttttgttgagtcggatggcgaaaatttgctt
caagccttgcagcgcgacattcttgagctggaagaccacgcggtagtggccgtcagccac
gaaacgcagaacaccagcatgcaaaaacgcctgctggctctcgacgatcgttcgatcgat
tttcacgcctgccacagcccgcagcgtgaagtggaagtgcttcacgatcggctgctggcc
atgatggctgacgatcctgaactgatgccgcgcgatgtcattgtgatgatggcggatatc
gacagctatacgccgtttattcaggcggtgtttggcaacgcgccagataaccgctacctg
ccttttgccatatccgatcagcgtgcgagacatgcgcatcccgccttgcaggcggtaatc
agcctgctggatttaccgacgagccgttttacggcggaacaggttctggcgttgcttgaa
gtgcccgcgctggccgcgcgtttcggtattcaggaagaagggctccggcgtctgcgcctg
tgggtggtggaatccggcgtgcgttggggactggatgacgacaacgtgcgcgatctgatg
ctgccgccaacagggcagcatacgtggcgttttggcttgacgagaatgctgctgggctat
gcgatggacagtcaggtcggcgactggcagggcgtgctgccttatgatgaatccagcgga
ttgattgcggagctggccggtcaactggccgaactgctgatgcagattcaccactggcgt
cagcgcttgtttctgccgcgcgtgcttgtcgactggctaccgttatgtcgagagctgatc
gaaaccttctttgacgctgacagtgagaccgaagcggcgctggcgttagttgaaaaacag
tggcagtacgtgattggtatgggcacgatggcgcattatccgcaacaggtgccaatctcc
cggttacgtgatgaactgtcgcgtcgtctcgatcaggagcgactcagccaacgttttctt
gctggttcgatcaacttttgtacgctgatgccgatgcgttccattccgttcaaggtcgtg
tgtttgttgggcatgaatgacggcgtttatcctcgaacgctgccacctctcgggttcgat
ctgatggggcggaaaatcaagcgcggcgatcgtagccgacgtgatgatgaccgctatctg
tttcttgaggcgctgctgtcggcgcagcataaactctacatcagctatatcgggcgctcg
atccaggataatacgcgtcgctatccttccgtattggtcagcgaactgacggaatatatc
gcacaaagctacgttctgccgggcgatgaagcgctggatattgatagcagcgcggagcgc
gtgatgaagcacctttgccgcgaacatagccgtatgccttttgatgcgaataacttcctg
tctgcaccgcagccgttgagttttgcggccgagtggctggcggcggcgaaccgaaaaggg
gaggctcagcctgatttcgatcgcgaagcgctgtccgcaagagcgagtgatagggatgtc
agtctggacgatttgaagcgtttttatcgtcatcctgtgcgagccttttttcaactgcgg
cttggcgtgagttttatgctgcacagtgatgagctgttggatgaagagccctttgtggtt
gatagccttaatcgctatcaattgaatagcgagttgcttaataccttgattaatgaaggc
gataccgaaaaactgtatcgccgtgccagagccgcgggtgaactgccctatggcgcgttt
ggcgaaatttactggcaggaacagcagcaggagatggcgcagttggctgcgcgtgtgcgt
gatgaattaacgccgtcgctgtcggtgagccgggaagtggatattctcctcgacggcgtg
cgcgtcagcggctggttgaatcaggtgcagccggatggcttgctgcgctggcgtcccggc
acgctttccatgaaggatggtattacgctgtggttggagcatctggcctactgtgcaacg
ggcggtcagggtgaaagtcgactgtatgggcgggaagagacggcgtggcgctttgctgcc
ttgtcggaagcgcaggccagagaacatttggctgtcatgctggatggttatcgtcaggga
atgagcaagccgctgttattgctcaataaagcggggagcgcctggctggctgaatgttat
gatcgcgaaagcgatagcctgcggtcggatgaggaggcgcagaacaaagcgcgtgcccgt
ttactgcaagcctggcagggcaacatgggaatgcggggtgagggggaggattattacctg
caacgcattatccgtgagttggatgaaaagcgaatgaatgaggtgattgaagcggcgcaa
atctggctactgccaccgttccgctctaatctggcgtga
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