Pectobacterium brasiliense: B5S52_17025
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Entry
B5S52_17025 CDS
T06364
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5S52_17025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbra03019
]
B5S52_17025
Messenger RNA biogenesis [BR:
pbra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B5S52_17025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ARA77495
UniProt:
A0A086EHK9
LinkDB
All DBs
Position
complement(3815283..3815816)
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AA seq
177 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
RKKDVRVLASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNESDINMQSSGTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFINPVILLQESVAARVVTPSGPRRKRG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccaaatgttggtattgtaatttgtaatcggcagggg
caggtgatgtgggcccggcgctatggtcagcactcctggcagtttccgcagggggggatt
aaccccggtgaaagtgctgagcaggcgatgtaccgcgaactgtttgaagaagtcgggtta
agaaaaaaggatgtgcgcgtattggcatctacccgtaactggttacgctataaattacca
aagcgtttggtgcgttgggatacaaaaccggtctgtatcggccaaaagcagaaatggttt
ttgctacagttgatgtgtaatgagtcggatatcaatatgcagagcagtggcacgccggaa
tttgatggctggcgctgggtgagttactggtatccggtacgtcaggtcgtctcttttaag
cgagatgtgtatcgtcgcgtgatgaaggaatttatcaatccggtgatactgcttcaggag
agtgttgcggctcgggtggttacgccatctggtcctcggcgaaaaagagggtaa
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