Pectobacterium brasiliense: B5S52_17180
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Entry
B5S52_17180 CDS
T06364
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00330
Arginine and proline metabolism
pbra00480
Glutathione metabolism
pbra01100
Metabolic pathways
pbra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
B5S52_17180
09106 Metabolism of other amino acids
00480 Glutathione metabolism
B5S52_17180
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
B5S52_17180
Enzymes [BR:
pbra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
B5S52_17180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ARA77522
LinkDB
All DBs
Position
complement(3844204..3846357)
Genome browser
AA seq
717 aa
AA seq
DB search
MKQLKIAANAAVATRLITTREIVALSQTDFTDVAAVVVSIEEARSGILSILQHTGFSIPA
FVEEPDEDKELDVLPAGSEWLVLDDDGEHANVLERAAKAYQDTLLPPFFDTLTKYVNMKN
TTFACPGHQGGQFFRKHPAGRQFFEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKHA
ARVFNADKTYFVLNGTSSANKVVTNALLARGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TVRNPFGFIGGVDAHCFDEAYLRKLIAEVAPERANEPRPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQRRFCNHKQLNNAFMLHASTSPFYPLFAALDVNAKMHEGASGRRMWMD
CVKLGIEARKQLLTRCSLIKPFVPVTVGGALWQDHDTETIAQDVRFFNFEPGEKWHAFEG
YAEDQYFIDPCKLLLTTPGIDASSGDYTEFGIPATILANYLREHGIIPEKCDMNSILFLL
TPAEDAAKMQELVNALVHFETLIARDAPLSEVLPSLYQKYKERYRGYRLRRLCQEMHDFY
AQHNVKDLQKAMFRKTEFPSVVMLPQDANREFVRGNIELIPIDEAEGRIAAEGALPYPPG
VLCVVPGETWGGAVQRYFLALEAGINLLPGFSPELQGVYSVAEEDGSKRLYGYVVEQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggcgaatgcagcggttgccacccgtttaatcacaacgcgc
gagattgtcgcgttgagtcagaccgatttcacggatgtggcggcggtcgtggtttctatt
gaggaagcccgtagcggtattctgtcgatattgcagcacaccggttttagtattccggcg
tttgtcgaagagcctgatgaagataaagagctggatgttctgcctgcgggcagcgaatgg
ctggttcttgatgacgacggcgagcacgccaacgtgctggagcgagcggcgaaagcctat
caggatacgctgttgccaccgtttttcgatacgctgaccaaatacgtcaacatgaaaaac
acgacgtttgcctgtccggggcatcagggcggtcagttcttccgcaagcacccggcgggg
cgtcagttttttgagttttacggtgagaacgtgtttcgttcggacatctgtaacgcggac
gtcaaactgggcgatttgctgatccacgaaggggcggcgaagaaggcgcagaagcacgct
gcgcgcgtgtttaacgccgataaaacctattttgtgttgaacggcacctcctcggcgaac
aaagtggtgacgaatgcgttgctggcgcgcggcgatctggtgctgtttgatcgcaacaac
cataagtccaaccaccacggcgcgctgattcaggcgggtgcgacgccagtttatctggaa
accgtgcgtaacccgttcggctttatcggcggcgtggatgcgcactgttttgatgaagcc
tatctgcgcaagctgatcgcggaagtcgcgccggaacgcgccaacgagccgcgcccgttc
cgtctggccgtcattcagcttggcacctatgacggcacgatttataacgcgcgtcaggtc
gtcgatagcatcgggcacctgtgcgactacattctgtttgactccgcctgggtcggctat
gagcagtttatcccgatgatggagcagtgttcgccgctgttgctggatctgaatgagaac
gatccggggattttcgtgacgcagtcggtacataagcagcaggcgggattctcccagact
tcgcagatccacaagaaagatacccacatcaaaggccagcgtcgcttctgcaaccataaa
cagctgaataacgcctttatgctgcacgcctcgaccagcccgttttacccattgttcgcc
gcgctagacgtcaatgccaaaatgcatgaaggggcaagcgggcgtcgtatgtggatggac
tgcgtgaagctgggcattgaggcgcgtaagcagctgctgacgcgttgttcgctcatcaaa
ccgttcgtgcctgtgacggtgggcggcgcgctttggcaggatcacgatacggagaccatc
gcgcaggacgtgcgcttcttcaactttgagccgggcgagaaatggcatgcgttcgaaggg
tacgcggaggatcagtattttatcgatccttgcaagttactgctgacgacgccgggtatt
gatgcgagcagcggcgattataccgaatttggtattccggcgacgatcctggccaactac
ctgcgcgagcacggcattatccctgaaaaatgcgacatgaactcgatcctgttcctgcta
acgccagcggaagacgctgcaaaaatgcaggagctggtgaatgcgctggtgcatttcgaa
acgctgatcgcccgcgatgcgccgctgagtgaagtgctgcccagcctgtatcagaaatac
aaagagcgttatcgcggttaccggctgcgtcggctgtgtcaggaaatgcatgatttttat
gctcagcacaacgtgaaagatctgcaaaaagcgatgttccgcaaaaccgagtttccgtcc
gtggtgatgttgccacaggatgccaacagggaatttgtgcgcgggaatatcgagctgatt
cctatcgacgaagcagaaggacgtatcgcagcggaaggcgcattgccgtatccgccgggc
gtactctgtgtcgtgccgggtgaaacctggggcggggcggtacagcgctattttctggcg
ctggaagcgggcattaacctgctaccgggcttctcgccggaattgcagggtgtctatagc
gtcgcagaagaagatggcagcaagcgcctgtacggttacgtagtagaacagtaa
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