KEGG   Pectobacterium brasiliense: B5S52_18655
Entry
B5S52_18655       CDS       T06364                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pbra  Pectobacterium brasiliense
Pathway
pbra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B5S52_18655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbra03019]
    B5S52_18655
   03016 Transfer RNA biogenesis [BR:pbra03016]
    B5S52_18655
Enzymes [BR:pbra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     B5S52_18655
Messenger RNA biogenesis [BR:pbra03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     B5S52_18655
Transfer RNA biogenesis [BR:pbra03016]
 Prokaryotic type
  tRNA degradation factors
   B5S52_18655
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_RRP5 KH_2 S1_2 OB_RRP5_4th aRib KH-I_KHDC4-BBP DUF4172 KH_SLS1_2 Spt6_S1
Other DBs
NCBI-ProteinID: ARA77792
LinkDB
Position
complement(4181917..4184037)
AA seq 706 aa
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFSGPIGAARVGYLNDQYVLNPTMDELKESRLDLVVA
GTEGAVLMVESEADILSEDQMLGAVVFGHEQQQIVIQNINALVAEAGKPKWEWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVDVIKADVVAALQAEDETLNAGDIQEILGNV
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATTQTQEAAAPSSEE
NT seq 2121 nt   +upstreamnt  +downstreamnt
ttgctgaatccgatcgtccgtaagttccaatatggtcagcataccgtcacgttagagacc
ggtatgatggcacgccaggctaccgccgctgtgatggtaagcatggatgacaccgcagta
ttcgttactgtggtcggcgcgaaaaacgccaaacccggccaaagtttcttcccattaacg
gttaactatcaggagcgtacttacgctgctgggcgtttccctggtggttttttccgtcgt
gaaggccgtccaagcgaaggcgaaacgctgatttctcgcttgatcgaccgcccaatccgc
cctctgttcccagaaggtttcctgaatgaagttcaggtgattgcgaccgtcgtttctgtt
aacccacaggttagccctgacatcgttgccatgattggtgcctctgcggcgttgagcctg
tctggtattccattcagcggccctatcggcgctgcgcgcgtcggttacctgaacgatcag
tatgtcctgaacccaacgatggatgagctgaaagaaagccgtctggatctggtggttgca
ggtacggaaggcgcggttctgatggtggaatccgaagccgacattctgagtgaagatcag
atgctgggtgctgtggtgtttggccacgagcaacagcagatcgttatccagaacatcaac
gctctggttgctgaagcaggcaaaccgaagtgggaatggcatgcgccagaagttaacgtt
tctttagagcagcgtgtacaggctttgtctgaagcacgtctgggtgacgcttaccgcatc
actgaaaaacaagagcgttatgcacaggttgacgtcatcaaagctgatgttgttgccgct
ctgcaagccgaagacgaaacgctgaatgcgggcgatatccaggaaattctgggtaacgtt
gagaaaaatgtcgtacgtagccgcgtgctggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtgcgtactggcgtgctgccgcgtacccacggttct
gcactgttcacccgtggtgaaacgcaggcgttggtcaccgcaacgttggggactgagcgt
gacgcgcagaatattgacgaactgaccggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactctgtcggtgaaaccggtatggtcggttcgcctaagcgtcgtgag
atcggtcacggtcgtctggctaagcgtggcgtgttggcagttatgccgaaggcgaacgaa
ttcccgtacaccgtgcgtgtggtgtctgaaatcacggaatccaacggttcttcttccatg
gcgtctgtctgtggtgcttctctggcactgatggatgcgggcgtgccaatcaaatcagcc
gttgcgggtatcgcgatgggtctggttaaagaaggcgacaattttgttgttctgtctgac
attctgggtgacgaagaccacctgggcgatatggacttcaaagttgctggtagccgtgaa
ggtatcaccgcgctgcagatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgctttgaatcaggccaaaggtgcacgtttgcacattctgggcgtgatggagcaggcg
atcagcacaccacgtggcgatatttctgaattcgcaccgcgtattcacaccatcaagatc
agtaccgataagattaaagatgtgatcggtaaaggtggttctgtgattcgtgcgctgacg
gaagaaacaggcacgactattgaaattgaagacgatggtactgtgaagatcgcttcaact
gacggcgaaaaagcgaaacacgcgattcgtcgtattgaagagatcactgccgaaatcgaa
gtcggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgtcgct
attggcggcgggaaagaaggcctggtgcatatttctcagatcgccgataagcgcgtagag
aaagtgactgactacctgcaaatgggtcaggaagtgccggtcaaggttctggaagttgat
cgccagggtcgcgtgcgcttaagcatcaaagaagcaactacgcaaactcaggaagcggca
gccccgtcttctgaggaataa

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