Pectobacterium brasiliense: B5S52_19610
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Entry
B5S52_19610 CDS
T06364
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbra03000
]
B5S52_19610
Transcription factors [BR:
pbra03000
]
Prokaryotic type
Other transcription factors
Others
B5S52_19610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_16
AAA
NACHT
AAA_22
AAA_19
MCM
AAA_14
T2SSE
BrxC_BrxD
AAA_7
AAA_30
AAA_2
ABC_tran
AAA_33
TsaE
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ARA77966
LinkDB
All DBs
Position
4379678..4381255
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AA seq
525 aa
AA seq
DB search
MKRRVVIGVLGTTLDKRGKRENRWTKWRPTVGLCQQPDFPVDRLELLHQSRNEGMAQQVA
EDISVVSPATQVTLQTVELRDPWNLEEVYSAFLDFASRYPFDTENEEYFVHITTGTHVVQ
ICWFLLTEARYLPAKLLQTAPGEKADRPAPQGIYAIIDLDLSRYATLTSRFQHEQERSVS
FLKSGIETRNSTFNALIDQIERVALRSTAPMLLTGPTGAGKSFLAQRIYQLRQSRHLVSG
RFVAVNCATLRGDNAMSTLFGHVKGAFTGALQARTGLLREADGGMLFLDEIAELGLDEQA
MLLKAIEEKSFLPFGSDKEVSSDFQLIAGTHRNLHEWIAQGKFREDLYARINMWTFPLPG
LAERREDIEPNIEFELQRFARDHKTQIRFDKDARQRYLTFACSSQAAWRGNFRELSSSIT
RMATLAEQGRITVTLVEEEITRLRANWQSDAPTTALPPELTNIDLFEQHQLETVLDVCRT
ANSLSEAGRQLFAVSRQQKQKPNDADRLRKYLARFGLSWEELKRV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcgcgtcgtcattggtgtgctgggcaccacgttggacaaacgaggtaaacgg
gagaatcgctggacaaaatggcggcctaccgtcggcctatgccagcagccggattttccg
gtcgatcgactggagctgctgcatcagtcacgcaacgaggggatggcacagcaggtggcg
gaggatatctccgtggtgtcacccgctacgcaggtcacgcttcagaccgttgagttacgc
gatccgtggaatctggaagaggtctacagcgcctttctggactttgcgagccgctacccg
ttcgatactgagaacgaagagtatttcgttcatatcaccacgggtactcacgtcgtgcag
atttgctggttcctgttgaccgaagcccgctacctacccgccaagctgctgcaaaccgca
ccgggagagaaagcggatcgccccgcaccgcagggcatctatgccattatcgatctggat
ctcagccgctacgcaacactcaccagccgcttccagcatgagcaagagcgctctgtctcg
ttcctgaaatcgggcatagaaacgcgcaacagcacgttcaacgcgctgatcgaccagatt
gaacgtgtcgcgctgcgttctaccgcgccgatgctcttaaccggaccaaccggtgcgggg
aaatcctttctggcacagcgtatctatcagctacgccagtcccgccatctggtcagcggt
cgatttgtcgcggttaactgcgccacgctgcgtggcgataacgcgatgtcgacactgttc
ggccacgtaaaaggggcgtttaccggtgcgttgcaggcgagaaccggactgctacgtgaa
gcggacggcgggatgctgtttctggatgagatcgccgaacttgggctggatgaacaggcg
atgctactcaaagccattgaagaaaaaagctttttaccgtttggctcggataaagaagtc
agcagcgatttccaactcatcgctggcacacaccgcaacctgcacgagtggatcgcacag
ggcaaattccgtgaagatctctacgcccgtatcaacatgtggaccttccccttgccgggg
ctggcggaacgtcgagaagatatcgaaccgaacattgaattcgaactccagcgcttcgca
cgcgatcacaaaacacagatccgcttcgataaagacgcacggcagcgctatctcacgttt
gcctgctcatcgcaggccgcgtggcgcggcaacttccgcgaactcagctcttccatcacc
cgcatggcgacgctggcagaacaaggacgcatcaccgtgacactggtagaggaagaaatc
acgcgcctgcgggccaattggcaaagcgatgccccgacaaccgcgctaccgcccgaactc
accaacatcgacctcttcgaacagcatcagcttgaaacagtgctcgacgtctgccgtacc
gccaattcgctctccgaagccggccgccagctgttcgccgtctcacgccagcaaaaacaa
aagcctaacgacgctgaccgactgcgtaagtatctggcacgttttgggctgagctgggag
gagttgaagcgggtataa
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