Pectobacterium brasiliense: B5S52_22085
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Entry
B5S52_22085 CDS
T06364
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00040
Pentose and glucuronate interconversions
pbra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B5S52_22085
Enzymes [BR:
pbra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
B5S52_22085
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
ARA78409
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All DBs
Position
complement(4924358..4926592)
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AA seq
744 aa
AA seq
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MKRCSSPKCDSLRKHRSSRLAAVALTNALLFSFSTHAATESTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPGDNADLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGVPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKITVSNAQLTTTPAQTKASP
EFKAKAYDPLLQVMSSPKTTSEHYVVQARANYAGTIAVSQNGQPLGEAKQVKAGETLSLP
AKIAGNSAEFKIAYQPTEGDDKAVKESTFKVERVAYADAKNLYASPQGSASNDGSKNAPI
DLASAVAALPTGGTIWLNDGDYSATEIPVSASGQQKTVKNLFAVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLAHHADDTGIQVTSTADVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNVDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKMGGEGQPVAHQVKNSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGVFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEITVNNFVS
VAIPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcaccaaaatgtgattcattacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattactctttagctttagtacacacgccgcgacagaa
tcaacccctgtctggcacggcatcgcctttggtcaatcaacagacgtaaacttctcatcc
aatgtcctgccggaaaagattggtgttaacgacgtcaccattaatggaaagaaattagca
ccgggggataacgctgatttgtccgcccctatcacgatcgaaagtcgtggcggaaagatt
gccaacacccatgacgggctgacgttcttctatacgcagttgcctgcgaatgtgaatttt
acgcttcagtctgacattaccgtggaacagtttgggccagaaaacggtgccaagccggcg
gctcaggaaggggcagggattctggtgcgcgatattatcggcgtgccgcgtcaggaaccg
ctgaaagaagggtatgaagaattccctgcggcatccaacatggtgatgaacgccatcatg
acgcaggataagaaatctcataccgaaatcaaattgcaggctattttgcgtaatggcgtc
acacagccgtggggcaatgccggtgcgaaaattaccaagaccagctaccaggaaaatgtg
aatctggagcaaacgccgacgttccgtctgaagctggaacgtaccaatgacggctttatt
acctcttatgcgccgaaaggcacggataactgggtatcaaaagaagtcaaaggcgcggac
gtcgttaccaagctggataaagaccactactacgtcggtttctttgcttcccgtaacgcc
aaaatcaccgtcagcaatgcacagttgactaccacgccggcgcagaccaaagcgtcaccg
gagttcaaggctaaggcctatgatcctttgctccaggtgatgtcatcgcctaaaaccacc
agcgaacactatgtggttcaggccagagccaactacgccggcacgatcgcggtgtcgcaa
aacggtcagcccctgggtgaagcgaagcaggtaaaagcgggagaaaccttatctctgcca
gcgaagattgccggtaatagcgctgagttcaagattgcctaccagcctacggaaggcgat
gataaagcagtaaaagagagcacgttcaaggttgaaagagtggcctacgcagacgctaaa
aatctgtatgcttcgccacaaggttcagccagcaatgacggcagtaaaaatgcacctatc
gatttagccagcgccgtcgccgctctgccaactggtggcacaatctggctcaacgatggt
gattacagcgcaactgaaatccctgtcagcgccagcggccagcaaaaaaccgtcaagaac
ctgtttgctgtcggtaataaagccgtgattcatggcctacagctgaaagcaagccattgg
catgttaaagggattgaaatcacagagaaaccgttccgtatcgaagggagctacaacacc
atcgaacgtgttctggcgcaccacgctgacgataccggtattcaggtgacttcgacggcc
gatgtgggtagacctctgtgggccagccacaacctgattctgaattctgaatctcacagc
aatcaggacccaggcaaaattaacgccgacggtttcgcggtaaaaatgcgtgtgggtgaa
ggcaacgtgattcgcggcgcgttctcgcacaataacgtcgatgacggcttcgatctgttt
aacaaaatcgaagacggtgcaaacggcgttgtggtgatcgagaattcaattgccatgaac
aacaccagcaacggcttcaaaatgggtggtgaaggacagccagtggcgcatcaggttaaa
aacagcattgctgtgggcaacaaacttgatggtttcactgacaacttcaaccctggtgcc
ttgatcgttgaagacaacatcgcgttagataacgaacgctttaacttcattttccgccca
agcccttactctggtccggaaaaacaaggcgtcttcaagaacaacgtttcgctgaaaacc
aaagcgggtaaatatgatgatgcggttgtcggcaatatcgataacaccaactacttcatc
aaaggcgaccgttcggttaacgcgcaaggtaaggaaatcaccgtaaataatttcgtatcg
gtagccatccctgagacgtttacgcgtgatgccaaaggcaatctggtacttggcgacttc
ctgaagaaaaaataa
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