Pseudomonas brenneri: QDY63_00300
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Entry
QDY63_00300 CDS
T10502
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pbre Pseudomonas brenneri
Pathway
pbre02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QDY63_00300 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbre02044
]
QDY63_00300 (tssC)
Secretion system [BR:
pbre02044
]
Type VI secretion system
Imp/Vas secretion system core components
QDY63_00300 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
TssC
Motif
Other DBs
NCBI-ProteinID:
WJM91400
LinkDB
All DBs
Position
64071..65567
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AA seq
498 aa
AA seq
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MTDNTAREGAQNLGATQEASEFANLLLQEFKPKTERAREAVETAVRTLAEQALAQTDLVS
NDAIKSIESIIAAIDAKLTAQVNQVIHHPDFQQLESAWRGLHYLVNNTESDEQLKIRVLN
ISKNDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLG
ELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHFGWC
SRIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTD
FAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDE
MQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEDVEGNPGYYNSKFYLRPHYQLE
GLTVSLRLVSKLPSAKSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaataccgcccgcgaaggcgctcagaacctgggtgccacccaagaagccagc
gagtttgcaaacctgctgctgcaagaattcaagcccaagaccgagcgtgcccgcgaagcc
gtcgagaccgccgtgcgcaccctggccgagcaggccctggcgcagacggacctggtgtcc
aacgacgcgatcaagtcgatcgaatcgatcatcgccgccatcgacgccaagctcaccgcc
caggtcaaccaggtcatccaccacccggatttccagcagttggaaagcgcctggcgcggc
ctgcactacctggtcaacaacaccgagagcgatgagcagctgaagattcgcgtgctcaac
atctcgaaaaatgacctgcacaagaccttgaaaaaattcaagggcaccgcgtgggaccaa
agcccgatcttcaagaagatgtacgaggaagagtacggccagttcggtggtgaaccttac
ggttgcctggtgggcgattactacttcgaccagtcgcctccggatgtggagctgctgggc
gagctgtcgaaggtctgcgccgccatgcactcgccattcattgccgccgcttcgccgacc
gtgatgggcatgggctcgtggcaggaactgtcgaacccgcgcgacctgaccaagatcttc
accaccccggaatacgccggctggcgctcgctgcgtgagtcggaagactcgcgctacatc
ggcctgaccatgccgcgcttcctggcacgtctgccgtatggcgccaagaccgatccggtg
gaagccttcgccttcgaagaaaacaccgacggcgccgacagctccaagtacacctgggcc
aacgccgcgtacgcgatggcggtgaacatcaaccgttcgttcaaacacttcggctggtgc
tcgcgcattcgtggcgtggagtctggcggcgaggtggaaaacctgccagcccatacgttc
ccgaccgatgacggtggcgtggacatgaagtgcccgaccgaaatcgccatcagcgaccgc
cgtgaagcggagctggcgaagaacggtttcatgccgctgctgcacaagaaaaacaccgac
ttcgccgcgttcatcggcgcccagtcgttgcagaaaccggccgaatacgacgacccggac
gccaccgccaacgccaacctggccgcgcgcctgccgtacctgttcgccacctgccgtttc
gcccactacttgaagtgcatcgtgcgcgacaagatcggttccttcaaagagaaggacgag
atgcagcgctggttgcaggactggatcctcaactacgtcgacggggatcctgcgcactcc
accgaaaccaccaaggcccagcacccattggctgccgccgaggtgatcgtggaagacgtc
gaaggcaacccggggtactacaactccaagttctacctgcgtccgcactaccagctcgaa
gggctgaccgtgtcactgcgcctggtatcgaaactgccttcggcaaaaagcgcgtaa
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