Pseudomonas brenneri: QDY63_05565
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Entry
QDY63_05565 CDS
T10502
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00470
D-Amino acid metabolism
pbre00550
Peptidoglycan biosynthesis
pbre01100
Metabolic pathways
pbre01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QDY63_05565 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QDY63_05565 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
QDY63_05565 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbre01011
]
QDY63_05565 (ddlA)
Enzymes [BR:
pbre01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
QDY63_05565 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbre01011
]
Precursor biosynthesis
Amino acid ligase
QDY63_05565 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
GARS_A
RimK
Motif
Other DBs
NCBI-ProteinID:
WJM92377
LinkDB
All DBs
Position
1238899..1239993
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AA seq
364 aa
AA seq
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MSQLRVGIIFGGRSAEHEVSLQSARNIVDALDRTRFEPVLIGIDKAGHWHLNDTSNFLLN
QENPALIALNQSNRELAVVPGKASQQLVETSGQSLLEHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGIAVAPFITLNRGNAARTTFDQARQKLGL
PLFVKPANQGSSVGVSKVADETEYLAAIELALGFDEKVLVESAVKGREIECAVLGNERPI
ASGCGEIVVRDGFYSYDSKYIDDQAAQVLVPADIRVEDSERIRALAVEAFEVLGCAGLAR
VDVFLCEDGEVLINEVNSLPGFTRISMYPKLWQAAGMSYSELVSRLIELALERHGLRKGL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttgcgggtaggtattatttttggtgggcgttcggccgagcatgaggtgtcg
ttgcagtcggcacgcaacatcgtcgacgcccttgaccgcacgcgttttgagccggtgttg
atcggtatcgacaaggccggccattggcacctgaacgacacctctaacttcctgctcaac
caggaaaacccggcgctgatcgctctcaaccagtccaaccgcgaattggcggtggtgccg
ggcaaggccagccagcaactggtggaaacctcgggccagagtctgctggagcacgtcgat
gtgatcttccccatcgtccacggcaccctcggcgaagacggttgcctgcaaggtttgctg
cgcatggcggacttgccgttcgtgggttccgacgtgctgggttcggcggtgtgcatggac
aaggacatcagcaaacgcctgctgcgcgacgccggtattgccgtggcgccctttatcacc
ctcaaccgtggcaatgcggcacgcaccaccttcgaccaggcgcggcaaaagctgggtttg
ccactgtttgtcaaaccggccaaccaaggctcctcagtgggcgtgagcaaggtggctgac
gaaaccgagtatctggccgccattgaactggccctgggcttcgatgaaaaagtgttggtg
gagtctgccgtcaaaggccgggaaatcgaatgcgcagtgctgggcaacgagcgtcccatc
gccagcggctgtggcgagatcgtggtgcgtgacggcttctattcctacgacagcaaatac
atcgacgaccaggctgcgcaagtgctggtgcctgccgatatccgtgtcgaagacagcgag
cgcattcgcgccctggccgttgaggcctttgaagtgctgggctgcgcgggcctggcacgg
gtcgatgtgtttctttgcgaggacggtgaagtcttgatcaatgaggtcaactcattgccc
ggttttacccgcatcagcatgtaccccaagttgtggcaggcggcggggatgagctacagc
gaactggtcagccgcctgatcgaactggcgctggagcggcatgggttgcgcaagggcttg
aagatcagccgctaa
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