Pseudomonas brenneri: QDY63_05845
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Entry
QDY63_05845 CDS
T10502
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbre Pseudomonas brenneri
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbre03400
]
QDY63_05845 (phrB)
Enzymes [BR:
pbre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QDY63_05845 (phrB)
DNA repair and recombination proteins [BR:
pbre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QDY63_05845 (phrB)
Prokaryotic type
QDY63_05845 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
WJM92427
LinkDB
All DBs
Position
complement(1288055..1289497)
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AA seq
480 aa
AA seq
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MHLIWLRSDLRLHDNTALAAACQRGPTAAVYLITAEQWLAHDDAPCKVDFWLRNLKTLSQ
ALGQLNIPLLIRHADTWDQVPQVLVELCQALSVETVHVNDEYGIHESRRDAAVAQALETQ
GVSFHSYLDQLLFQPGSVLTKTGTYFQVFSQFRKVCYNRLHSTLPRRIPTPKAQATLSLA
SDAVPEQVKGFAPPSDTLRALWPAGEDEAHRRLGQFADAQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQSNQGEFESGDTGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRHAPEDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEGRFIK
QWLPQLSGLNKKDVHNPDAAAGLFGVADYPRPIVDLKRSRERALAAFRALPSRQAGGVYE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgatctggctgcgcagcgacctgcgcctgcatgacaacaccgccctcgcggcc
gcctgccagcgcggcccgacggcggcggtgtacctgatcactgccgagcagtggctggcc
catgacgatgcgccgtgcaaggtggacttctggctgcgcaacctcaagacgctgagccaa
gccctgggccaactgaatattcccctgctgatccgccatgccgacacctgggatcaggtg
ccacaggtgctggtcgagttatgccaggccttgtcggtcgagacggttcacgtcaacgac
gaatacggaatccacgaaagccgacgcgatgccgccgtggcccaggccctggaaacacaa
ggcgtgagctttcacagttatctggaccaactgctgttccaacccggcagtgtgctgacc
aagaccggcacctacttccaggtgttcagccagtttcgcaaggtctgctacaaccgcctg
cacagcaccctgccacgccggataccgacacccaaggcccaggccacactgtcattggcc
agcgatgccgttcccgagcaggtcaagggatttgccccacccagcgacaccctacgcgca
ctctggccggcgggagaagacgaggcgcaccgacgccttgggcaatttgccgacgcgcag
atcagctactacaaggacgagcgcgacttcccggccaagcccggtaccagccagttgtct
gcgtacctcgcggctggcgtggtttcgccgcgccagtgtctgcatgccgcattgcaaagc
aaccagggtgaattcgaaagtggcgacaccggtgccgtcacctggatcaacgagctgctg
tggcgtgagttctacaaacacatcctggtgggctacccacgggtgtcgcgccatcgtgcc
tttcgcccggaaaccgaagccgtggcctggcgtcacgcgcccgaggacctcgccgcctgg
caggaggcgcgtaccggtctgccgatcattgatgctgcgatgcgccagttgctggaaacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcctgaccaaaaacctgctg
atcgactggcgcgaaggcgagcgcttctttatgcgtcacctgatcgacggcgacctggca
gccaacaacggcggctggcaatggagttcgtccaccggcaccgactcggcgccatacttc
cggattttcagcccgctgagtcagtccgagaagttcgatggcgaagggcgtttcatcaag
cagtggctgccgcaactgtcgggtctgaacaagaaggacgtgcacaaccccgacgccgcc
gccggcctgtttggcgtggccgactacccacggcccatcgtcgatctgaagcgttcccgt
gagcgcgcgttggccgcctttcgcgccctgccctcgcgccaggcgggaggcgtgtatgag
tga
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