Pseudomonas brenneri: QDY63_12835
Help
Entry
QDY63_12835 CDS
T10502
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00300
Lysine biosynthesis
pbre00470
D-Amino acid metabolism
pbre01100
Metabolic pathways
pbre01110
Biosynthesis of secondary metabolites
pbre01120
Microbial metabolism in diverse environments
pbre01230
Biosynthesis of amino acids
Module
pbre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QDY63_12835
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QDY63_12835
Enzymes [BR:
pbre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QDY63_12835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WJM93719
LinkDB
All DBs
Position
2709541..2710887
Genome browser
AA seq
448 aa
AA seq
DB search
MTHSSSLPGLRHLWVERLLDQHRTRLTELVDGLGSPLHLLCPQIFHANVEAFQHSFTDAQ
VRGSLLFAKKANKANCFIQACAQCAIGVDVASVGELQKALAGGVAGGDIGVSGPRKSDQL
LGLGLSHQCLLAVDSLEELMRIQQLAQSMRQRAHLLLRYCPSSQPHSRFGLNARECDQAL
VFCRQHVANLDLQGFSFHLGGYDTEQRAQVASHLIDLCQASELDNCRTVNLGGGFAVRYV
DPAQWRAFMAEDCAEGYHGEKGFAGFYSYGALRAGAEALDDILATPVSPGLSLAQKVIEH
GVRLIIEPGRALLDQAGISVFRVQGVKDRSASDGYALVTVQGSSFSLSEQWFNSEFLPDP
LLLPATPRAPSPFVACIGGATCLESDMLTWRKVAFDCPIQAGDLLIYLNTAGYQMDSNES
PFHEAPLPHKVVVELRNQHLRWKLDSLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacccattccagctcattgcccggcctgcgccacctgtgggtcgagcggctgctcgat
cagcaccgcacccgattgaccgaactggtcgacggccttggctcgccattgcatctgctg
tgcccgcagatctttcacgccaatgtcgaagccttccagcacagcttcaccgacgcccag
gtgcgcggcagcctgttatttgccaagaaggccaacaaggccaactgctttatccaggcc
tgcgcgcagtgtgcgattggcgtggatgtggccagcgtcggtgagctgcaaaaggccttg
gcgggcggggttgccggcggtgatatcggcgtgtccggcccgcgcaagagtgatcagttg
ctggggttgggcttgagccaccagtgcttgctggcggtggattcgctggaggaactgatg
cgtatccagcagttggcgcaatcgatgcgacaacgggcgcacctgctgttgcgttattgc
cccagcagccagccccacagccgcttcggcttgaatgcccgggagtgcgaccaggccctg
gtgttctgccgccagcatgtggcgaacctggacttgcaaggcttttcctttcacctgggc
ggttatgacaccgagcagcgggcgcaagtcgccagccacttgatcgatctgtgccaggcc
agtgagttggacaactgccgcacggtcaacctggggggtggttttgccgtgcgttatgtc
gacccggcgcagtggcgggcctttatggccgaggactgtgccgagggttatcacggggaa
aaagggtttgccgggttctattcctatggtgcgttgcgcgccggggccgaggccctcgac
gatatcctcgccacgcccgtcagccccggcctgagcctggcgcaaaaggtcatcgaacac
ggggtgcgcctgatcattgaacctggccgcgccttgctcgaccaggccggcatcagtgtg
ttccgcgtgcagggcgtcaaggaccgcagcgccagcgacgggtatgcactggtcaccgtg
cagggcagcagcttcagcctctccgaacaatggttcaacagcgagttcctgcctgaccca
ctgctgctgccggcaacgccacgggcgccgtcgccctttgtcgcctgtatcggcggagcc
acctgcctggagtcggacatgctgacctggcgcaaagtcgccttcgactgcccgatccag
gccggcgacttgctgatctacctcaatactgccggctatcagatggactccaacgagtcg
ccatttcacgaagccccattgccccacaaagtggtggtggaactgcgtaatcaacacctg
cgctggaagctggacagcctggcgtga
DBGET
integrated database retrieval system