Pseudomonas brenneri: QDY63_20615
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Entry
QDY63_20615 CDS
T10502
Name
(GenBank) DEAD/DEAH box helicase
Organism
pbre Pseudomonas brenneri
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
AAA_22
DUF5624
Motif
Other DBs
NCBI-ProteinID:
WJM89758
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Position
4478562..4481255
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AA seq
897 aa
AA seq
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MSLPSPLTKPLAPSWANRFKEQSLERGRRYALENRVRIVESGDSTIIASCEGSGGNVYRQ
TISLRESAKGTLILVDSRCTCPVHTNCKHIAAVLLQVQETLAFPAAAKDAELLEKLQAVL
DNRVVLPQVVLEDVQPIPRLWLASIEFSAFEPRNGKMQRYIQHRAALSFNYLDNYVSGQK
NADIVVRQETQSLRIKRHPEIEQQYREQLRLLGFKIATRQSKALPESAGELFEMVNDSAW
LNFTLNASPTLRAEGWELQIDEDFGFDLSPVDDWYASVDEVPERDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPEKLARRRDDELILVNIPGLPNGGHGPLQVALPYGRLKPVLA
TLGEFYLQEPGSTALRLAKADAIRLNSLEDLPLQWEGGELIRNFAQRLRDIKDFTCTAPE
GLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKIAGRLDRPCMV
VMPTSLIPNWLDEAAHFTPQLKVLALYGAARKKHFAQLQDYDLLLTTYALLPKDIEQLAA
QPLHVLILDEAQYIKNPTSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWL
GDVKSFNRDYRVPIEKRGSEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVDLNE
AQRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGS
SSGKLDSLMEMLDELFAEGRRILLFSQFTSMLSLIEIELKKRGVAYALLTGQTRDRRTPV
KDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFV
YKMIARGTVEEKIQALQQEKSDLAAGVLDGRTTGDWKLGNEDIEALFAPLPNKQEKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccgtcgccgctgaccaaacccctggcgccttcctgggccaaccgcttcaag
gagcaaagcctggagcgcggccggcgctacgccctggaaaaccgcgtacgcatcgtcgag
tcaggcgacagcaccatcatcgccagctgcgaaggctcaggcggcaatgtctaccgccag
accatctccctgcgcgaatcggccaaaggcaccttgatcctggtggacagccgctgcacc
tgccccgtgcacaccaactgcaaacacattgccgcagtacttctgcaggttcaggaaacc
ctggcctttccggcagcggccaaggacgccgagctgctggagaagctccaggccgtgctg
gataaccgcgtagtgctgccacaagtggtgctcgaagacgtgcagccgatcccgcgcctg
tggctggccagcatcgagttcagcgcctttgagccgcgcaacggcaagatgcagcgctac
atccagcaccgcgcggcgctgtcgttcaactacctggacaactacgtcagcggccagaaa
aatgccgacatcgtagtccgccaggaaacccagagcctgcggatcaagcgccatcccgag
atcgagcaacagtatcgcgaacaattgcgcctgctcggtttcaagatcgccacccgccag
agcaaggccttgccggaaagcgccggcgagctgtttgagatggtcaatgacagcgcctgg
ctgaacttcaccctcaacgcctcgcccaccctgcgcgccgagggttgggagttgcagatc
gatgaggacttcggcttcgacctgagccccgtcgatgactggtacgccagcgtcgatgaa
gtgccggaacgcgactggttcgacctggagctggggattatcgtcaatggcgaacgcctg
agcctgctgccgatcctgttgaacctgatgcgctcccacaccgaaatcctcaacccggaa
aagctcgcgcgccgccgcgacgacgaactgatcctggtgaacatccccggtttgcccaat
ggcggccacggcccactgcaggtggcgctgccctatggccggctcaaaccggtgctggca
accctcggcgagttctacctgcaagagcccggcagcaccgccttgcgcctggccaaggcc
gacgccattcgcctcaactcgctggaagacctgcccctgcaatgggaaggcggcgaactt
atccgcaactttgcccaacgcctgcgggatatcaaggacttcacctgcacggcgcccgag
ggcctgaacgcgacattgcgcccgtatcagctcgaaggtctgagctggatgcagtccctg
cggcaactggaagtgggcgggattctcgcagacgacatgggcctgggcaaaaccctgcag
accctggcgcatattctcagcgagaaaatcgccgggcgcctggaccgaccgtgcatggtg
gtgatgccgaccagcctgatccccaactggctcgacgaagcggcgcacttcaccccgcag
ctcaaggtcctggcgctgtacggagccgcacgcaagaagcacttcgcgcaactgcaagat
tacgacctgctgctgaccacctatgccctgctgcccaaggacatcgagcaactggccgcg
cagccgctgcatgtgctgatcctcgacgaagcccaatacatcaagaaccccaccagcaag
gccgcccaggccgcccgcgagctgaatgcacgccagcgcctgtgcctgagcggcacgccg
ctggaaaatcacctgggcgagctgtggtcgctgttccacttcctgctgccgggttggctg
ggtgatgttaagagcttcaaccgtgattaccgcgtgcccatcgaaaaacgcggcagcgag
gtgcgattgcagcacctcaacggccggataaaaccgttcctgctgcgccgcaccaaggaa
caggtggccaccgagctgccgcccaagaccgagatcatccactgggtcgatctcaatgaa
gcccagcgtgacgtgtacgaaaccatgcgcctggccatggacaagaaggtccgcgacgag
atcacccgcaagggcgtggcccgcagccagatcatcattcttgaagcgctgctaaagctg
cgccaggtctgttgtgacctgcgcctggtcaacgatgccaccctgcccgcacgcggcagc
agctcgggcaagctcgacagcctgatggagatgcttgacgagctgtttgccgaagggcgc
aggattctgctgttttcccagttcacctcaatgctcagcctgattgagatcgagctgaaa
aaacgcggagtcgcctatgccttgctgaccggccagacccgtgatcggcgcacgccggtc
aaggacttccagagtggcaagttgcagatcttccttatcagcctcaaggccggtggcgtc
gggcttaacctgaccgaagccgacaccgtgatccactacgacccgtggtggaaccctgcc
acggaaaaccaggccaccgaccgcgcctaccgcatcggccaggaaaaaccggtgtttgtg
tacaagatgattgcgcgcggtaccgtggaagagaagatccaggcgttgcagcaggaaaag
tcagacctggcggcgggcgtgctggatggacgcaccactggcgactggaagttgggcaac
gaggatatcgaggcgctgtttgcgccgctgcccaataagcaagagaagcgctga
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