KEGG   Pseudomonas brenneri: QDY63_20670
Entry
QDY63_20670       CDS       T10502                                 
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
pbre  Pseudomonas brenneri
Pathway
pbre00071  Fatty acid degradation
pbre00280  Valine, leucine and isoleucine degradation
pbre00310  Lysine degradation
pbre00362  Benzoate degradation
pbre00380  Tryptophan metabolism
pbre00410  beta-Alanine metabolism
pbre00640  Propanoate metabolism
pbre00650  Butanoate metabolism
pbre00907  Pinene, camphor and geraniol degradation
pbre00930  Caprolactam degradation
pbre01100  Metabolic pathways
pbre01110  Biosynthesis of secondary metabolites
pbre01120  Microbial metabolism in diverse environments
pbre01200  Carbon metabolism
pbre01212  Fatty acid metabolism
Module
pbre_M00087  beta-Oxidation
pbre_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pbre00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    QDY63_20670 (fadB)
   00650 Butanoate metabolism
    QDY63_20670 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    QDY63_20670 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    QDY63_20670 (fadB)
   00310 Lysine degradation
    QDY63_20670 (fadB)
   00380 Tryptophan metabolism
    QDY63_20670 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    QDY63_20670 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    QDY63_20670 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    QDY63_20670 (fadB)
   00930 Caprolactam degradation
    QDY63_20670 (fadB)
Enzymes [BR:pbre01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     QDY63_20670 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     QDY63_20670 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     QDY63_20670 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     QDY63_20670 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2
Other DBs
NCBI-ProteinID: WJM89768
LinkDB
Position
complement(4490021..4492168)
AA seq 715 aa
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMASSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGLVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPIVYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggctgatgcatcgatcaaaggtgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagcttgtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgccgaccgttgccgcgatcaatggcatcgccctgggcggcggtctggaa
atgtgcctggccgcggacttccgcgtcatggcctccagcgcgaaaatcggcctgccggaa
gtcaaactgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgtatcatcggt
gccgacaatgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtgggcgcagtcgatgccgtggttgctccggacaaactcgcagaagctgcactgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttc
gtcgccggtcaagcgggtcctaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggccctggagatcgaagccgccggcttcgtcaaa
ctggccaagacgtctgctgcacagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaaacaggccgctgtactc
ggcgccggtatcatgggtggcggtattgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcaaggcctggcagaagccgccaagctg
ctggttggcctcgttgataaaggtcgcatgacggctgcgaagatggctgaagtgctcaac
ggcattcgtcctacgctgtcctacggcgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaagcggtcctggcggaagttgaagcccaggtcaag
gacgacaccatcctggcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgctggcgtggac
tttgtgcgtatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggaccgcatgaaagacgaccgtcgttcggccgttgatgcgctctacgaggccaagcgc
ctgggccagaagaatggcaagggtttctacgcctacgagaccgacaagaagggcaagcag
aagaaagttgccgatccatcggttcacgaagtgctggctccgatcgtctacgaacagcgt
gaagtgtccgacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggcggtgcgctgcgttacatcgactctatcggtgtg
gccgagttcgttgccctggctgatcagtacgctgatctgggcccgctgtaccacccgact
gcgaagctgcgcgagatggccaagaacggccagagcttcttcggttaa

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