Pseudomonas brenneri: QDY63_21380
Help
Entry
QDY63_21380 CDS
T10502
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00071
Fatty acid degradation
pbre00280
Valine, leucine and isoleucine degradation
pbre00310
Lysine degradation
pbre00362
Benzoate degradation
pbre00380
Tryptophan metabolism
pbre00410
beta-Alanine metabolism
pbre00640
Propanoate metabolism
pbre00650
Butanoate metabolism
pbre00907
Pinene, camphor and geraniol degradation
pbre00930
Caprolactam degradation
pbre01100
Metabolic pathways
pbre01110
Biosynthesis of secondary metabolites
pbre01120
Microbial metabolism in diverse environments
pbre01200
Carbon metabolism
pbre01212
Fatty acid metabolism
Module
pbre_M00087
beta-Oxidation
pbre_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QDY63_21380
00650 Butanoate metabolism
QDY63_21380
09103 Lipid metabolism
00071 Fatty acid degradation
QDY63_21380
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QDY63_21380
00310 Lysine degradation
QDY63_21380
00380 Tryptophan metabolism
QDY63_21380
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QDY63_21380
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QDY63_21380
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QDY63_21380
00930 Caprolactam degradation
QDY63_21380
Enzymes [BR:
pbre01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QDY63_21380
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QDY63_21380
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QDY63_21380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
McrA_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WJM89904
LinkDB
All DBs
Position
complement(4657568..4659712)
Genome browser
AA seq
714 aa
AA seq
DB search
MTDAIRYEKGQDQIVVLTLDMPGQSANTMNAAYREAMATTVARLDAEKDEIAGVIITSAK
KTFFAGGDLNELIKVDKPHAKAFYDMVLGLKAQLRSLETLGKPVVAAINGAALGGGWELC
LACQHRVALDHPSVQIGLPEVTLGLLPGGGGVVRMVRMLGLEKALPYLLEGKKVSAQKAL
QAGLIDELAADRDELLAKSRAWILANPAAKQPWDIKGHQIPGGTPSNPKVAQMLAIAPSI
LRSKTNGCFPAPEKILCAAVEGAQVDFDTAHLIETRYFTELTTGQVAKNMIGTFWFQLNE
INAGGSRPTGFAPYVTRKVGILGAGMMGAGIAYASASAGVDVVLKDVTLAAAEKGKAHSA
ALLDKKVSRGQLTVEQRDSTLARIRPTDSDADLAGCDLIIEAVFEDRDLKAKVSAAAQRV
VGADAVIASNTSTLPISGLASAVPDQGKFIGLHFFSPVEKMPLVEIIKGANTSDETLARG
FDFVLQIKKTPIVVNDSRGFFTSRVFGTFTNEGITLLGEGVAAPMIETEARKAGMPIGPL
AISDEVSLSLMSHIRQQTAKDLQAEGKTLPEHPAFAVIDLLLNEYKRPGKAAGGGFYEYP
SGGQKHLWPELKARFERPGQRISAQDVRDRLLFIQAIETVRCVEEGVLMSTADANVGSIF
GIGFAAWTGGALQFINQYGLNDFVARARYLAEQYGERFNPPALLLEKAAQGATF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccattcgttacgaaaaaggccaggaccagatcgtggtgctgaccctcgac
atgcccggccagagtgccaacaccatgaacgcggcctaccgcgaggccatggccaccact
gtcgcgcgcctggacgcggaaaaggatgagattgccggggtcattatcacttcggcgaaa
aaaactttctttgccggcggcgacctcaatgaactgatcaaagtcgacaagccccacgcc
aaggcgttctacgacatggtcctgggcctgaaggcgcaactgcgcagcctggaaaccctc
ggcaagccggtggtggcggcgatcaacggcgcggcgctcggcggtggctgggagctgtgc
ctggcgtgccagcatcgtgtggcgctggatcatccctcggtgcagatcggcttgccggaa
gtcaccctcggcctcttgccgggcggcggcggggtggtgcggatggtgcgcatgctgggc
ctggagaaggccttgccgtacctgctggaaggcaagaaggtcagcgcgcaaaaggcccta
caggccggtctgatcgacgagttggcggcggatcgcgatgagttgctggccaagtcccgg
gcctggatcctggccaatcctgcggctaaacagccttgggatatcaagggccaccagatc
ccgggtggcacaccgtccaacccgaaagtcgcgcaaatgctcgccattgcgccatcgatc
ctgcgcagcaaaaccaatggttgcttccccgcgccggagaaaattctctgtgctgccgtg
gaaggcgcccaggtggacttcgacaccgcacacctgatcgagactcgctacttcaccgag
ctcaccaccggccaggtggcgaagaacatgatcggcaccttctggttccagctcaacgaa
atcaacgccggtggctcacgccctacagggtttgcgccgtatgtcacgcgcaaggtcggc
atccttggggctggcatgatgggggcggggattgcctacgccagcgcatcggcgggagtg
gacgtagtgctcaaggacgtcacgctggcggcggcagagaagggcaaggcccactcggca
gcgctgctggacaagaaggtcagccgtgggcagctgacggtcgagcagcgcgacagtacc
ctggcgcggatccgtcctacagacagcgacgccgacctggccggttgcgacctgatcatc
gaagccgtcttcgaagaccgcgacctcaaggccaaggtctcggctgcggcccagcgtgta
gtaggggctgacgcggtgattgcttccaatacgtccaccttgcctatcagcggcctggcg
agcgcggtgcccgatcaaggtaaattcatcggcttgcacttctttagcccggtggaaaaa
atgcctctggtggaaatcatcaagggcgccaacaccagcgacgaaaccctggctcgcggt
tttgatttcgtactgcaaatcaagaaaaccccgattgtggtgaatgacagtcgcggcttc
ttcacctcacgggtgttcggcaccttcaccaacgaaggcattaccctgctcggcgaaggt
gtggccgcgccgatgatcgagaccgaggcgcgcaaggccgggatgccgattggcccgttg
gcgatctcggacgaagtttccctcagcctgatgagccatatccgtcagcagaccgccaag
gacctacaagccgaaggtaaaacactgccggaacacccggcgtttgcggtgatcgacctg
ctgctcaatgaatacaagcgtcccggcaaggcggcgggcggtggtttctacgagtacccc
agcggtgggcagaagcatttgtggcctgagctcaaggcgcgctttgaaaggcccgggcag
cggatctcggcgcaggatgtgcgcgaccgcctgctctttatccaggccatcgagactgtg
cgctgtgtggaggagggcgtattgatgtccaccgccgatgccaacgtgggttcgatcttc
ggtatcggttttgcggcctggaccggcggggcgctgcaatttatcaaccagtacgggctc
aacgacttcgtggcgcgggcgcgttacctggccgagcagtacggcgagcggttcaacccg
ccagccttgctgctggaaaaggctgcccagggcgctacgttctag
DBGET
integrated database retrieval system
