Pseudomonas brenneri: QDY63_21635
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Entry
QDY63_21635 CDS
T10502
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00541
Biosynthesis of various nucleotide sugars
pbre01100
Metabolic pathways
pbre01250
Biosynthesis of nucleotide sugars
Module
pbre_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QDY63_21635 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbre01005
]
QDY63_21635 (kdsB)
Enzymes [BR:
pbre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
QDY63_21635 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pbre01005
]
Lipid A
QDY63_21635 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF4913
DUF2064
Motif
Other DBs
NCBI-ProteinID:
WJM89955
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Position
complement(4708881..4709645)
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AA seq
254 aa
AA seq
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MTTAFTVVIPSRYASTRLPGKPLQMIGDKPMIQLVWEQACKSSAQRVVVATDDLRIIEAC
KGFGAEAVLTREDHNSGTDRLAEVATHLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAA
HPEARMATLAEPIEDIQTLFNPNVVKVVSDINGLALTFSRSTLPWARDEFAKQRDVLPAG
VPYRRHIGIYAYRAGFLHDFVSWGPCWLENTEALEQLRALWHGVRIHVDDAMQAPPAGVD
TQEDLERVRRLLGV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgccttcactgttgtcattccatcgcgctacgcctccacccgcctgcccggc
aaaccgctgcaaatgatcggcgacaagccgatgatccagttggtctgggagcaggcctgc
aaaagcagcgcccagcgcgtggtggtggccactgatgacctgcggatcatcgaggcctgc
aaggggtttggcgccgaagcggtgctgacccgtgaagatcacaactccggcaccgaccgc
ctggccgaagtcgccacgcacctgggcctggcgccggacgccattgtggtcaacgtgcaa
ggcgacgagccgctgatcccgccgagtgtcatcgatcaggtcgccgccaacctggccgcc
catcctgaagcacgcatggcgaccctggccgaaccgatcgaagacatccagaccctgttc
aatccgaacgtggtgaaggtggtcagcgacatcaatggcctggccctgacgttcagccgt
tcgaccctgccctgggcgcgcgatgaattcgccaagcagcgtgacgtattgccggccggc
gtgccgtatcgccgccatatcggcatttacgcctaccgcgccggcttcctgcatgatttc
gtcagctggggcccgtgctggctggagaacaccgaggccctggagcaactgcgggccctg
tggcatggcgtgcggattcatgtcgacgatgccatgcaagccccaccagccggcgtcgat
acccaggaagaccttgagcgcgtacgccggttgctgggggtttga
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