Pseudomonas brenneri: QDY63_22265
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Entry
QDY63_22265 CDS
T10502
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00061
Fatty acid biosynthesis
pbre00071
Fatty acid degradation
pbre01100
Metabolic pathways
pbre01212
Fatty acid metabolism
pbre02024
Quorum sensing
pbre04146
Peroxisome
Module
pbre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
QDY63_22265 (fadD1)
00071 Fatty acid degradation
QDY63_22265 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
QDY63_22265 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
QDY63_22265 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbre01004
]
QDY63_22265 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbre04147
]
QDY63_22265 (fadD1)
Enzymes [BR:
pbre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
QDY63_22265 (fadD1)
Lipid biosynthesis proteins [BR:
pbre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
QDY63_22265 (fadD1)
Exosome [BR:
pbre04147
]
Exosomal proteins
Exosomal proteins of breast milk
QDY63_22265 (fadD1)
Exosomal proteins of breast cancer cells
QDY63_22265 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
WJM90068
LinkDB
All DBs
Position
complement(4824583..4826274)
Genome browser
AA seq
563 aa
AA seq
DB search
MIEDFWKDKYPAGIAADINPDEYQNIQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNLLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALICLANMAHLAEKVVPKTAVKYVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPQAIKFNDVLAKGHGQPVNEVSPASEDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCNICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTLCKVISDEGVELPLGEIGELCVKGPQVMKGYWQ
REDATTEILDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHMRANVTGYKVPKAVEFREALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtaccccgccgggattgctgcagacatcaatcca
gacgagtatcaaaatattcaggcggtactgaaacagtcctgccagcgcttcgccgacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgagttgtacgaattgtccggt
gcctttgccgcgtacctgcaacagcataccgacttgcagcccggtgatcgaatcgccgtg
caattacccaacctcctgcaatacccggtcgccgtgttcggggctatccgtgccggcctg
atcgtggtcaataccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggggccaaagccctgatctgcctggccaacatggcgcacctggcagaaaaagtcgta
cccaagactgccgtcaagtacgtgatcgtcaccgaagtggctgacctgttgccgccgctc
aagcggctgctgatcaacagcgtcatcaagtacgtgaaaaaaatggtcccggcctatcac
ttgccccaggcgatcaagttcaacgacgtcctggccaagggccatggccagccggtcaat
gaagtcagccccgccagcgaagacgtggccgtgctgcaatacaccggcggcaccaccggc
gtggccaagggcgcgatgctgacccatcgcaacctggtggccaacatgctgcagtgcaag
gcgctgatgggctccaacctcaacgaaggctgcgagatcctgatcacaccgctgccgctc
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggagttgtcgaagtggaag
ttcagcggctttgtcggcctgaacaccctgttcgtagccctgtgcaacaacgaaggcttc
cgcaagctggatttctcggcgctcaaggtcaccctgtcgggcggcatggccctgcaactg
gcggcggccgagcgttggaaggccgtgaccggctgcaacatctgtgaaggttacggcatg
accgaaaccagcccggtggccacggtcaacccgatccagcatatccagatcggcaccatc
ggcattccggtgccctcgaccctgtgcaaagtcatctccgacgaaggtgtcgagttgccc
ctgggcgaaatcggcgagctgtgcgtcaagggcccgcaagtgatgaaaggctactggcag
cgcgaagatgccacgaccgagatcctcgacagcgaaggctggttgaagaccggtgacatc
gcgatcatccagccagacggctacatgcgcatcgtcgaccgcaagaaggacatgattctg
gtctcgggcttcaacgtctaccccaacgagctggaagacgtgctggcgggcctgccaggc
gtgctgcaatgcgcggccattggtgtgccggacgagaagtcgggcgagcacatcaagctg
ttcatcgtggtcaagccgggcgcaaccctgaccaaggagcaggtgatggagcatatgcgc
gccaatgtcaccggctacaaagtgccaaaggctgttgaattccgcgaagcgctgccgacc
accaacgtgggcaagatcctgcgtcgtgagctgcgtgacgaagagctgaagaagctgggc
ctgaagaagtaa
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