Pseudomonas brenneri: QDY63_23945
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Entry
QDY63_23945 CDS
T10502
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QDY63_23945 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbre03019
]
QDY63_23945 (rnc)
03009 Ribosome biogenesis [BR:
pbre03009
]
QDY63_23945 (rnc)
03036 Chromosome and associated proteins [BR:
pbre03036
]
QDY63_23945 (rnc)
Enzymes [BR:
pbre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
QDY63_23945 (rnc)
Messenger RNA biogenesis [BR:
pbre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QDY63_23945 (rnc)
Ribosome biogenesis [BR:
pbre03009
]
Eukaryotic type
90S particles
RNase
QDY63_23945 (rnc)
Prokaryotic type
rRNA processing factors
QDY63_23945 (rnc)
Chromosome and associated proteins [BR:
pbre03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
QDY63_23945 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
WJM90380
LinkDB
All DBs
Position
complement(5192085..5192774)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFAAGEALFNRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVAKERVMAWLASEIDSLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRVFFVECEVTLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctttgagtcgtcttgagcgtcagctcggctacaccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagttttgccgggcgcaacaatgaacgcctggaa
ttcctcggtgatgccatccttaacttcgccgctggcgaagccctgttcaaccgcttcccc
ctggcccgtgaaggccagctgtcgcgcctgcgcgcgcgcctggtgaagggcgagaccctg
gccgtactggcccgtggttttgacctgggcgaatacctgcgcctgggttccggtgagttg
aagagcggcggtttccgtcgcgagtcgatcctggccgatgccctggaagccctgatcggt
gcgatctacctggatgccgggatggaagtggccaaggagcgggtcatggcctggctggcg
tcggaaatcgacagcctgaccctggtggataccaacaaggatcccaagacccgcctgcag
gaatttttgcagtcgcgcggctgcgaactgccacgctacgaagtggtggatatccagggt
gaaccgcactgccgtgtgttcttcgtcgaatgcgaagtcaccttattgaacgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga
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