Pseudomonas brenneri: QDY63_24380
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Entry
QDY63_24380 CDS
T10502
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00470
D-Amino acid metabolism
pbre00550
Peptidoglycan biosynthesis
pbre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QDY63_24380 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QDY63_24380 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbre01011
]
QDY63_24380 (murD)
Enzymes [BR:
pbre01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QDY63_24380 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbre01011
]
Precursor biosynthesis
Amino acid ligase
QDY63_24380 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WJM90466
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Position
complement(5295116..5296462)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELVTLRRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDIELYVMELSSFQLETTDQLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLMGEGLPCWTFGLSKPD
FKAFGIREESGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRDLDGVSYYNDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGAD
FKDLKSPVAAHCRAVVLMGRDSDLIAAALGDAVPQVRATSLDDAIAQCRGLAQPGDAVLL
SPACASFDMFKNYEERGQLFARAVEGLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgccgtggccgatacgcgggaa
aatccaccggagctggtcacgctgcgccgtgactacccgcacgtggaagtgcgttgtggc
gagttggatgtcgagtttctgtgccgtgccgacgagctctacgtgagcccgggcctggcc
ctggctacaccggccctgcaagccgccgcagcgcgtggcgtgaagttgtctggcgatatc
gagttgtttgcccgcaacgccaaggcgccgatcgtggcgatcagcggctccaacgccaag
agcaccgtcactaccctggtcggcgagatggcggcagcggccggcaagcgcgtggccgtg
ggcggtaacctcggtacgccggcgctggacctgctcagcgacgatatcgagctgtacgtc
atggagctgtctagcttccagctggagactaccgatcaactcggcgccgaagtggccacc
gtgttgaacgtcagcgaagaccatatggaccgctacagcggcctgccggcttatcacctg
gccaagcaccggatcttccgtggtgcgcggcaagtggtggtcaatcgccaggatgccctg
agtcgtccgctgatgggcgagggtctgccgtgctggaccttcggcttgagcaagcccgat
ttcaaggcctttggtatccgggaagagagtggcgagaaatacctggccttcgaattccag
aacctgatgccggtgcgtgaactgaagatccgtggcgcccataaccaatccaatgccctg
gcggccttggcactggggcacgcggtcggcttgccgttcgacgcgatgttgtcgagcctg
cgcacctttgccggcctcgaacaccgctgccagtgggtacgcgacctcgatggcgtgagc
tactacaacgactccaaggccaccaacgtcggtgccgcactggccgccattgaaggcctg
ggcgccgatatcgacggcaagctggtgctgatcgccggtggcgatggcaagggtgccgac
ttcaaggacctcaagagcccggtggctgcccattgccgtgcggtggtgctgatgggccgt
gacagcgacttgatcgctgctgccctgggcgacgctgtgccgcaagtgcgcgccacctcg
ctggacgacgccatcgcccaatgccgcggcctggcccagccgggcgatgcggtgctgctg
tcgccagcctgcgcgagtttcgacatgttcaagaactacgaagagcgcggccagttgttc
gcccgcgccgtggagggcttggcatga
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