Pseudomonas brenneri: QDY63_24460
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Entry
QDY63_24460 CDS
T10502
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pbre Pseudomonas brenneri
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbre03009
]
QDY63_24460
Ribosome biogenesis [BR:
pbre03009
]
Prokaryotic type
ribosomal protein modification factors
QDY63_24460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
WJM90479
LinkDB
All DBs
Position
complement(5310818..5313007)
Genome browser
AA seq
729 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPASASDAGTYIAGKDLPLEQTIANMSAILAGLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAAFVHYPDERWFKPGRKDALPTEILDEYCLKIYNRDGELRGSHLIDTNSGNEERGIV
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPAHVLAKYPGILAGIQALEEQGFPVLVKDASLGGEFPVMCVTLMSPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDYEFVEWDFSGQGEDSNAEEAATLFGILEGMGKQVYMAVYEHIGAKACRILVPDY
SEIYPVDDLIWDNTNKALFFRADILNLHSLDEDGLQALVERLVESELDDYTDITTLIGIE
FDDNTAWGQLTILELKLLIYLALQQFEEAKEAVEMFLQYNDNTVERGLFYQAVNAVLEMQ
LDEDLELEDYEANLRRMFGNERMDAAIGSVDGRVRFHGLTPTSMKLEGLDRHLRLIDSYK
KLHAARANS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaacctccggcttgaagccaagttcgatgacttc
accgtggtggccgaccagccgattcgctacaagggcgatggctcggcccctggtccgttc
gactacttcctggcttcgtcggcgttgtgtgcggcttactttgtgaagttgtattgcagc
acgcgcaacatccccacggataatatccgtctgtcacagaacaacattgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgagttgcctgcggatatttccgacaag
gatcgccaaggcatcctgcgctccatcgaccgctgtacggtcaagaaggtcgtacaggcc
gggcctgagtttgtcatcgaagaggtggaaaacctcgacgccgatgcccaggcgttgctg
atgccggcttctgcttcggacgcgggcacttatatcgcgggcaaggacctgccgctggag
cagaccatcgccaacatgtcggcgattctcgcgggcctgggcatgaagattgagatcgcc
tcgtggcgcaatatcgtgcccaatgtctggtcgctgcatatccgcgatgcccattcgccg
atgtgctttaccaacggcaagggcgcgaccaaggaaggcgcactggcgtcggccctgggc
gagtttatcgaacgcctgaactgcaacttcttctacaacgaccagttctggggcgaagac
atcgccaacgcggcgtttgtgcattatccggacgagcgctggttcaagccgggccgcaaa
gatgcgctgccgactgagatcctcgacgagtactgcctgaagatctacaaccgtgatggc
gaattgcgtggttcgcacctgatcgacaccaactctggcaatgaagagcgcggcattgtt
tcgcttccgtttgtgcgccagtcggatggcgaggtggtgtatttcccctcaaacctgatc
gaaaacctgtacctgagcaacggcatgagtgccggtaacaccctggcggaagcccaggtg
cagtgcctgtcggagatcttcgagcgcgcggtgaaacgcgaaatcatcgaaggcgaattt
gccctgccggatgtaccggcccacgtgctggccaaatacccaggcatcctcgccggtatc
caggccctggaagaacaggggtttccggtgctggtcaaggacgcctccctgggcggtgaa
ttcccggtaatgtgcgtgaccctgatgagcccgcgcaccggtggtgtgtttgcctcgttc
ggtgcccacccaagcctggaagtggcgctggagcgcagcttgaccgagctgctccaaggc
cgcagtttcgaaggcctgaacgacttgccgcagccgacctttgaaggccatgcggtgact
gaaccgaataactttgtcgaacacttcatcgactccagtggcgtggtgtcgtggcgcttc
ttcagtgccaagtccgattacgaattcgtggaatgggacttctccggccagggcgaagac
tccaacgccgaggaagccgcgaccttgttcggcattctcgaaggcatgggcaagcaggtc
tacatggcggtctacgaacatatcggcgccaaggcctgccgcatcctggtgccggactat
tcggaaatctatccggttgacgacctgatctgggataacaccaacaaggcgttgttcttc
cgcgccgatatcctcaacctgcacagcctggatgaggacggcctgcaagcgctggtcgag
cgcctggtggaaagcgaactggatgactacaccgatatcaccaccctgatcggtatcgag
ttcgacgacaacaccgcatgggggcagttgaccatcctggagttgaagctgctgatctat
ctcgccttgcagcagtttgaagaggcgaaagaggcggtggagatgttcctgcagtacaac
gacaacaccgtcgaacgcggcctgttctaccaggcggtgaatgcggtgctggagatgcaa
ctggacgaggacctggaattggaagactacgaggctaacttgcgtcgcatgtttggcaat
gagcgcatggatgccgccatcggttcggtggatggccgcgtgcggttccatggcttgacg
ccgaccagcatgaagctcgaaggcctggaccgacacctgcggttgatcgacagctataaa
aagctgcacgccgctcgggctaatagttag
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