Pseudomonas brenneri: QDY63_24805
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Entry
QDY63_24805 CDS
T10502
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00053
Ascorbate and aldarate metabolism
pbre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
QDY63_24805 (garD)
Enzymes [BR:
pbre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
QDY63_24805 (garD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF_GD_AH
Motif
Other DBs
NCBI-ProteinID:
WJM90546
LinkDB
All DBs
Position
complement(5377931..5379484)
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AA seq
517 aa
AA seq
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MQLIEHADSPRSIRLHERDNVVIVVNDQGVPAGTEFPDGLVTVEFIPQSHKVTLEDIPEG
GQIIRYGQTIGYALQPIPRGSWVQEDQLRMPTAPPLDSLPLSTEVPEAQAPLEGFTFEGY
RNADGTVGTRNILGITTTVQCVTGVLDHAVKRIKDELLPKYPHVDDVVALTHSYGCGVAI
TATDAYIPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHDNDSSVDLSEPWLYRLQD
ASHGFTEMIEQIMELAETRLKKLDLRRRETVPASELILGMQCGGSDAFSGITANPALGYA
SDLLLRAGATVMFSEVTEVRDAIYLLTSRAENQDVARELVREMDWYDRYLAKGEADRSAN
TTPGNKKGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKGKGLIFCATPASDFVCGTLQ
LAAGMNLHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRATIEELG
WELFHFYLDVASGKKQTWAERHKLHNDITLFNPAPIT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattgaacatgccgactcgccgcgctccattcgtttgcacgagcgcgacaat
gtagtgattgtggtcaatgaccagggcgtgccggccgggaccgagttcccggacggcctg
gtgaccgtggagttcattccccagagccacaaggtgaccctggaagatatccccgaaggc
ggtcagattattcgctatggccagaccatcggttacgccttgcagccgataccgcgaggc
agttgggtccaggaagatcagttgcgtatgccaacggcgccgccgctggacagcttgccg
ctgtccaccgaagtgcccgaggcccaggcgccattggaaggttttaccttcgaaggctat
cgcaacgcggatggcaccgtgggcacgcgcaatatcctcggcatcaccaccaccgtgcag
tgcgtgaccggcgtgctggaccacgcggtcaagcgcatcaaggacgagttgctgcccaag
tacccgcatgtcgatgacgtggtggccctgacccacagctacgggtgtggcgtggccatt
accgccaccgacgcctatatcccgatccgtaccgtgcgtaacctggcgcgcaacccgaac
ctgggtggcgaagccctggtgatcagcctgggctgcgagaaactgcaggccgggcaggtg
atgcacgacaacgacagctcggtggacctcagtgaaccgtggttgtatcgcctgcaggac
gcaagccatggtttcaccgaaatgatcgagcagatcatggaattggccgaaacccgcctg
aagaaactcgacctgcgccgccgcgaaaccgtaccggcgtcggagctgatcctcggtatg
caatgtggtggcagtgacgctttttccgggatcaccgccaacccggcgctgggttacgcc
tcggacttgttgttacgggcgggggcgacggtgatgttttccgaagtcaccgaagtgcgc
gatgccatttacctgctgacttcccgcgcggaaaaccaggatgttgcccgggaactggtg
cgggaaatggactggtacgaccgctacctggccaagggcgaggccgaccgcagcgccaat
accacgccgggcaacaagaagggcgggttgtcgaatattgtcgagaagtccctgggctcc
atcgtcaaatccggcagcagcgcgatcaatggcgtgcttgggcctggcgaacggttcaag
ggcaaaggcctgatcttctgcgcgacaccggccagcgattttgtctgcggcaccttgcaa
ctggcggcggggatgaacctgcatgtgttcaccaccggtcgcggcacgccctatgggctg
gcgatggcgccggtggtgaaggtctcgacccgtacggaactggcgcagcgctggccggac
ctgatcgatatcgatgccgggcggatcgccactggccgtgcaaccatcgaagagttggga
tgggagttgttccacttctatctggatgtggccagcggcaagaagcagacctgggctgag
aggcacaaactgcacaatgacattaccttgttcaatccggcgccgatcacctag
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