KEGG   Pseudomonas brenneri: QDY63_25695
Entry
QDY63_25695       CDS       T10502                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbre  Pseudomonas brenneri
Pathway
pbre03030  DNA replication
pbre03430  Mismatch repair
pbre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QDY63_25695
   03430 Mismatch repair
    QDY63_25695
   03440 Homologous recombination
    QDY63_25695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbre03032]
    QDY63_25695
   03400 DNA repair and recombination proteins [BR:pbre03400]
    QDY63_25695
Enzymes [BR:pbre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QDY63_25695
DNA replication proteins [BR:pbre03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     QDY63_25695
DNA repair and recombination proteins [BR:pbre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     QDY63_25695
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Ribosomal_L26
Other DBs
NCBI-ProteinID: WJM90710
LinkDB
Position
complement(5570999..5571610)
AA seq 203 aa
MERIAVIDFETTGISPSSSCRATEIAVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAEKVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLTSFAQLPHTGKAHRAMADAEMAANLTAHLAQELRRAHGLRDLSHD
LLCSLQKVPAAKINDHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacggatagcggtcatcgactttgaaaccaccggcatctcgccgagcagcagttgc
cgggccacggaaatcgccgtggtcatcctggagcggggccagatcgtggaccgctaccag
agcctgatgaacgctggcgtgcgcgtgccggggtttatcgaacaactgaccggcatcagc
aacgccatgctgcgcagtgcgccgccggccgagaaggtaatgaacgaggtcaatgagttt
gtcggcaccacgccactgctggcgcacaacgctgcgttcgaccagaagttctgggacttc
gaactcggtttgatccgccgcacccgtctgcaaaaattcgcctgctcgctactgttggcg
cgccggctgatgcccgccgcgcccaatcacaaactcggcaccctgacctcatttgcccaa
ctgccccacaccggcaaggctcaccgggccatggccgacgcggaaatggcggccaacctg
accgcccacctggcccaggaactgcgccgtgcccacggcttgcgcgacttgtcccatgac
ctgctgtgcagcttgcagaaagtgccggcggcaaagatcaatgatcatctgaagaaacat
cgcgggttctga

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