Pseudomonas brenneri: QDY63_25815
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Entry
QDY63_25815 CDS
T10502
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pbre Pseudomonas brenneri
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbre03016
]
QDY63_25815 (miaB)
Enzymes [BR:
pbre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
QDY63_25815 (miaB)
Transfer RNA biogenesis [BR:
pbre03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
QDY63_25815 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Fer4_12
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WJM90731
LinkDB
All DBs
Position
5595643..5596971
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AA seq
442 aa
AA seq
DB search
MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARI
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEIIHLAENGVREVTLLGQNVNGYRGQTHDGRLADLAELIRVVAAVDGIERIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILSAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSYSFVYSQRPGTPAADLADETPEALKKE
RLNALQHRLNQQGFEISRQMVGSTQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLIN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggtgaacatcaggccctggaagtcacggcgcgcgccgaagat
gccgacgtgatcctgctcaatacctgctcgatccgcgaacgggcccaggaccgggtctac
tcgcagctgggtcgctggcgtgaattgaaactggccaacccggacatggtaatcgccgtt
ggcggttgtgtggccagccaggaaggcgcggccattcgcgaccgcgcaccttatgtcgac
gtggtctttggcccgcagaccctgcatcgcctgccggagatgatcgacgctgcgcgcatc
accaagttgccgcaggtggacgtctcgttcccggaaatagaaaaattcgaccatttgccc
gagccacgcatcgatggcccgagcgcctacgtgtcggtaatggaaggttgcagcaagtac
tgcaccttctgcgtggtgccttatacccgtggcgaagaagtcagtcggccgttcgacgat
gtgctgtcagaaatcatccacctggctgaaaacggcgtgcgtgaagtgaccctgctgggg
cagaacgtcaacggctatcgtggccagacccacgacgggcgcctggcggacctggccgag
ctgattcgcgtggtcgcggcggtggacggtatcgagcgcatccgctacaccacctcgcac
ccgctggaattctccgacagcctgatccaggcccacgccgaagtgccggagctggtcaaa
cacctgcacttgccggtgcaatcgggctcggaccgtatcctgtcggcaatgaagcgcaac
cacacggccctggagtacaagtccaagctgcgcaaactgcgcgccgccgtgccgggtatc
tgcatcagttcggactttattgtcggcttccctggcgagaccgaaaaagacttcgagcag
accatgaagctgattgaagacgtcgggttcgatttctcctactccttcgtctacagccag
cgccccggcacaccagccgcggacctcgcggacgaaaccccggaggcgttgaaaaaagag
cgtctgaacgcactgcaacatcgcctcaaccagcagggtttcgagatcagccgacaaatg
gtcggttcaacccagcgcatcctggttaccgattactcgaagaaagacccgggcgaattg
cagggacggaccgagaacaaccggatcgtcaacttccgctgcgataacccgacgctgatc
ggccagttcgccgacgtgcacatcgacgcggcgcaaccgcactcgctgcgcggttcgctg
atcaactga
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