Pseudomonas brenneri: QDY63_25895
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Entry
QDY63_25895 CDS
T10502
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre00550
Peptidoglycan biosynthesis
pbre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QDY63_25895
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbre01002
]
QDY63_25895
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbre01011
]
QDY63_25895
Enzymes [BR:
pbre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QDY63_25895
Peptidases and inhibitors [BR:
pbre01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
QDY63_25895
Peptidoglycan biosynthesis and degradation proteins [BR:
pbre01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
QDY63_25895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WJM90746
LinkDB
All DBs
Position
complement(5611875..5613032)
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AA seq
385 aa
AA seq
DB search
MNITTLAKRLCLLVPLIIAPAAWAVEMMPAPPQLAAKSYVLMDAASGNVLVENNGDQRLP
PASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGII
IQSGNDASVALAEHIAGSEDAFADMMNKTVTDLGMTNSHFMNPTGLPNPDHYSSAHDMAI
LARAIIRVDPVHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSA
VRDGQRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELAQAPVWKGTERQV
KAGLADDLTLTMPKGQLKKLAASMTMNPQLTAPIAKGDVIGKVEVKLDDKVVHSADLIAL
DAVEEGGIFRRVWDSIRLFFYGLFN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccaccttagccaaacgcctgtgcctgcttgtcccgctgatcatcgcgccc
gctgcctgggccgtcgaaatgatgccagcgccaccgcaactggctgccaagtcctacgtg
ctcatggatgccgccagcggcaacgtgctggtcgaaaacaacggtgaccagcgcctgccg
ccggccagcctgaccaagctgatgaccgcctacatcgcgaccctggaaatccgtcgcggc
cagatcggtgaaaacgatccggtgaccgtcagcgaaaacgcctggcgtaccggtggttcg
cggatgttcatcaaggtcggctcccaggtgactgtcagcgacctgctgcacggcatcatc
atccagtccggcaacgacgccagcgtcgccctggccgagcacatcgccggcagcgaagat
gcattcgccgacatgatgaacaaaaccgtgactgacctgggcatgaccaacagccacttc
atgaacccgaccggcctgccaaacccagaccactactcgtcggcccatgacatggcgatc
ctggcccgcgcgatcattcgcgtcgacccggtgcactacgccatctactcccagaaagag
tttttctggaacaacatcaagcaacctaaccgcaacctgttgctgtggcgtgacaagacc
gtcgacggtctgaaaaccggccacaccgacgaagcgggctactgcatggtgtcctcggca
gtacgtgacggccaacgcctgatcgccgtggtgttcggcaccaacagcgaacaggcgcgt
gcggctgaaacccagaagcttttgacctacggtttccgcttcttcgaaacccagaccttc
taccagaagggcgctgaactggcccaggctccggtctggaaaggcaccgagcgtcaagtc
aaggccggcctggctgatgacctgaccctgaccatgcctaaaggccagctcaagaaactg
gctgccagcatgaccatgaacccacaactgaccgcgccaatcgccaagggcgatgtgatc
ggtaaagtcgaagtgaagctggacgacaaagtcgtacacagtgccgatctgatcgcactc
gacgctgttgaggaaggtggtatcttccgccgcgtgtgggatagcatccgtctattcttc
tacggcttgttcaactga
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