Pseudomonas brenneri: QDY63_26980
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Entry
QDY63_26980 CDS
T10502
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pbre Pseudomonas brenneri
Pathway
pbre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QDY63_26980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbre02000
]
QDY63_26980
Transporters [BR:
pbre02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
QDY63_26980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND_NTPase5
AAA_25
AAA_22
nSTAND3
AAA_28
FeoB_N
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
WJM90943
LinkDB
All DBs
Position
complement(5817647..5818759)
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AA seq
370 aa
AA seq
DB search
MSEVDSNDVLVSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGF
ETPTAGEILLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGLSKTDISE
RVKRVLSMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHM
QMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNTFVAN
FIGENNRLNGRLHSHTGERCVVELARGEKVEALAVNVGQIGGPVTLSVRPERVSLNGSSE
SCSNRFSGRVAEFIYLGDHVRVRLEVCGKADFFVKQPIAELDTALTVGDVVPIGWQVEHV
RALDPLLEAN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtggattcaaatgatgtgctggtcagctttcgtggtgtgcagaagagctac
gacggcgagaacctgatcgtcaaagacctcaacctggacattcgcaaaggcgagtttctt
accctgctggggccgtccggttcgggcaagaccaccagcctgatgatgctcgccggtttc
gagaccccgacagccggggaaatcctgctggccgggcgctccatcaacaatgtgccgccg
cacaagcgcgacattggcatggtgttccagaactatgcgctgttcccgcacatgactgtg
gccgagaacctggcgttccccctgtcggtaagggggttgagcaagaccgatatcagcgag
cgggtcaaacgtgtgctgagcatggtccagctcgatgccttcgcccagcgctaccccgcg
caactttccggcggccagcaacaacgggtcgcgctggcccgcgcactggtgttcgaaccg
caactggtgctgatggacgaacctctcggcgctctcgataaacagctgcgtgaacatatg
cagatggagatcaagcacctgcaccagcgcctcggcgtgaccgtggtctacgtgacccac
gaccagggtgaagcgctgaccatgtctgatcgggtggcggtgttccaccagggcgagatc
cagcagatcgcccctccgcgcaccttgtatgaagaaccgaaaaatacctttgtcgccaac
ttcattggcgagaacaaccgtttgaacggccgcctgcacagccataccggcgaacggtgt
gtggtcgagttggcgcggggcgagaaggtcgaggcgctggcggtcaacgtcggccagatc
ggtggcccggtgaccctgtcggtgcgcccggagcgggtcagtctcaacggttccagcgaa
agctgcagcaatcgcttctcgggccgggtggcggaatttatctacctgggcgaccacgta
cgcgtgcgcctggaggtctgcggcaaggccgatttctttgtgaaacaaccgatcgccgaa
ctggacacggcgctgacggtcggcgacgtggttccgattggctggcaagtcgagcacgtt
cgcgcactcgacccacttctagaggcgaattga
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