KEGG   Pseudomonas brenneri: QDY63_27475
Entry
QDY63_27475       CDS       T10502                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbre  Pseudomonas brenneri
Pathway
pbre03030  DNA replication
pbre03430  Mismatch repair
pbre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QDY63_27475
   03430 Mismatch repair
    QDY63_27475
   03440 Homologous recombination
    QDY63_27475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbre03032]
    QDY63_27475
   03400 DNA repair and recombination proteins [BR:pbre03400]
    QDY63_27475
Enzymes [BR:pbre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QDY63_27475
DNA replication proteins [BR:pbre03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     QDY63_27475
DNA repair and recombination proteins [BR:pbre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     QDY63_27475
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: WJM91037
LinkDB
Position
5920490..5921200
AA seq 236 aa
MSLFSWLRPSRPGLDEHQQARLQQLPAAPAVLGETTLRDQRWVVLDLETSGLNLNRDQVL
SIGAVVIEDGAVDFSQQFERTLQRAQTKLSPSVLIHGLGPSAIAAGCEPAEALLDFMDFV
GDSPLLAFHAPFDQHMLGRALKDSLGYRLAHPFLDVADLAPLLCPQAHIREAGLDDWIAH
FNLQVGERHHASADALATAELMLILFSRARQQGLDSPAALQQRLNQWKRRKQAPSF
NT seq 711 nt   +upstreamnt  +downstreamnt
gtgagcctgttcagttggctgcgcccttcccgtccgggactggatgagcatcaacaagca
cgcctgcagcaattgccagcagcgcccgcagtgctcggcgaaacgaccctgcgcgaccag
cgctgggtcgtcctggacctggaaaccagcggcctgaacctcaatcgcgatcaggtactg
tcgattggcgcggtggtgatcgaagacggtgccgtcgatttttcccagcagttcgagcgc
accctgcaacgggcgcaaaccaaactcagccccagcgtactgatccacggcctcggcccc
agtgcgatcgccgctggttgcgaaccagccgaggcgttgctggacttcatggactttgtc
ggcgacagcccactgttggcgttccatgcaccgttcgaccaacacatgctcggccgcgcg
ctcaaggacagcctgggttatcgcctggcccatccattcctcgacgtggcggacctggcg
ccgctgctgtgcccgcaagcgcatatccgcgaagccggcctggatgactggatcgcccac
ttcaacctgcaggtcggtgagcgccatcacgccagcgccgatgccctggccaccgctgag
ttgatgttgattctgttcagccgtgcccgccagcaagggctggacagccccgctgcgttg
cagcaacgcctgaaccagtggaaacgtcgcaagcaagccccttccttctaa

DBGET integrated database retrieval system