Pseudomonas brenneri: QDY63_28295
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Entry
QDY63_28295 CDS
T10502
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pbre Pseudomonas brenneri
Pathway
pbre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QDY63_28295 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbre03400
]
QDY63_28295 (mutM)
Enzymes [BR:
pbre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QDY63_28295 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QDY63_28295 (mutM)
DNA repair and recombination proteins [BR:
pbre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QDY63_28295 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
WJM91194
LinkDB
All DBs
Position
complement(6093789..6094601)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGLPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD
PHNHALLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAKGISRGRYLKLAIEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GAEACKVCGSELRNVMLGQRASVFCPKCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccagaagtcgaaaccacccggcgcgggatcgcgccgcacctggaaggc
cagcgggtcagccgggtgatcgtgcgtgagcgccgcctgcgttggccgattcccgaggac
ctggacgtacgcctgtccgggcagcgcatcgtgctggtggagcgtcgcgccaagtatctg
ctgatcaatgccgaagtcggcaccttgatcagccacttgggcatgtcgggcaacctgcgc
ctggtggaagtcggcctgccggcggccaagcatgaacatgtggacatcgaactggagtca
ggcctggccctgcgctacaccgacccacggcgctttggcgcgatgctctggagccaggat
ccgcataaccacgcactgctgctgcgcctggggccagagccgttgactgacctgtttgat
ggcgagcgcctgttccagctgtcccgtgggcgctccatggcggtcaagccgttcatcatg
gacaacgcggtggtggtgggcgtgggcaatatctacgcgaccgaggcgttgtttgccgcc
gggatcgacccgcgccgggaggccaagggcatttctcgtgggcgatatttgaagctggcg
attgagatcaaacgcattcttgcggctgccatcgagcgtggcggtacaaccttgcgtgat
tttattggcggcgacgggcagccggggtatttccagcaggagttgtttgtctacgggcgc
ggggccgaggcgtgcaaggtctgcgggagtgagttgcgtaatgtgatgctggggcagcgg
gcgagtgtgttttgcccaaaatgccagagctga
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