Pseudovibrio brasiliensis: KGB56_13735
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Entry
KGB56_13735 CDS
T11661
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbri Pseudovibrio brasiliensis
Pathway
pbri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KGB56_13735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbri03021
]
KGB56_13735
03400 DNA repair and recombination proteins [BR:
pbri03400
]
KGB56_13735
Enzymes [BR:
pbri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KGB56_13735
Transcription machinery [BR:
pbri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KGB56_13735
DNA repair and recombination proteins [BR:
pbri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KGB56_13735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF4249
TmoB
BVU_2266-like
Motif
Other DBs
NCBI-ProteinID:
QUS54453
UniProt:
A0ABX8AH96
LinkDB
All DBs
Position
3056031..3057053
Genome browser
AA seq
340 aa
AA seq
DB search
MTIQKNWQELIKPTKLDIRAGDDARFKASVIAEPLERGYGLTLGNALRRVLLSSLQGAAV
TAVQIDGVLHEFSSIPGVREDVTDIILNIKEVALRMEGEGPKRMVLRKQGPGAVYAGDIE
TVGDIEVLNPGLLLCNLDEGAEVRIEFTVNTGKGYVPAAANRPEDAPIGLIPVDSLYSPV
KKVSYKVENTREGQVLDYDKLTLTVETDGSVIPEDAVAFAARILQDQLSIFVNFEEPQRE
VQEDTVAELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVANWPPENIDELAKRYEDHQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgacaattcagaaaaactggcaagagcttatcaagccaaccaaactcgacattcgtgct
ggcgatgatgcacgcttcaaagcttctgtgattgcagaaccgcttgagcgtggctacggc
cttactcttggcaacgcactgcgccgcgttctgctgagctcccttcagggtgctgcagtg
accgctgttcagattgatggcgttctccatgagttctcatctattcctggcgttcgtgaa
gatgtgaccgacatcatcctgaacatcaaggaagtagcgcttcgcatggaaggcgaggga
ccaaagcgcatggttctgcgtaagcagggtccaggtgcggtctacgctggtgacattgaa
actgtaggtgacattgaggttcttaacccaggtctgctgctgtgtaaccttgatgaaggt
gcggaagttcgcatcgaattcactgttaacaccggcaagggttatgttcctgctgccgct
aaccgcccagaagacgctccaatcggcctgattccggttgacagcctgtattctccggtt
aagaaggtttcttacaaggttgagaacacccgtgaaggtcaggttcttgactatgataag
ctgactttgactgtagaaactgacggatctgtgatccctgaagatgcagtagctttcgct
gctcgtatcctgcaggatcagctgtctatcttcgtgaacttcgaagagccacagcgtgaa
gttcaggaagacacagttgcagaacttgcgttcaacccagcgctgctgaagaaggttgat
gagcttgagttgtctgtacgttcggcaaactgcctgaagaacgacaatatcgtatatatt
ggcgatctcattcagaagacagaagcagaaatgcttcgcacaccgaacttcggtcgtaag
tctctcaacgagatcaaagaagttctggcgcagatgggcctgcatctcggtatggaagtg
gcaaactggccaccagaaaatatcgatgagctggctaagcgctacgaagaccaccaatat
taa
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