Pseudonocardia broussonetiae: HOP40_01665
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Entry
HOP40_01665 CDS
T07210
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pbro
Pseudonocardia broussonetiae
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pbro03012
]
HOP40_01665
Translation factors [BR:
pbro03012
]
Eukaryotic type
Elongation factors
HOP40_01665
Prokaryotic type
HOP40_01665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
AbiEi_4
MMR_HSR1
eIF2_C
DUF8070
Motif
Other DBs
NCBI-ProteinID:
QJY44701
UniProt:
A0A6M6JE00
LinkDB
All DBs
Position
345418..347229
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AA seq
603 aa
AA seq
DB search
MQVIATAGHVDHGKSTLVRALTGMEPDRFAEEQRRGMTIDLGFAWTDLGAAGTVAFVDVP
GHERFVTTMLAGVGPVPAVLLVVAADEGWMPQSAEHLDALVALGVRDGLLVITRSDLMEP
DLALDDARTHLAGTPLADIPDVAVSALTGAGTDALRTALGALAARLPAPDDDADVRLWVD
RAFTVRGAGTVVTGTLPGGCLRAGDELELAGEEGVRRVTVRGLQSLGAPVGEARGVSRVA
VNLRGVPREAVTRGDALLARGAWLPVTTLDVRLHPTRDGTDDDLPRELVLHIGSAAVAAR
VRPLGADTVRLRLRHPLPLRVGDRAVLRDPGRRRVRAGITVLDVRPPELRRRGAAAARAA
ELSTMGAVPDPAAELRRRGVVRSADLAAMGVPVAGLGPAAGGWLVDPEHAAAAARALATA
VDAHDRADPLDPGLPTEAARRAAGLPDARLLDAVLAAAPGLAHRDGRVARPRAGALAPAL
VTALERLRADLADAPFAAPDAARLAELGLGPRELAALVRAGELLRVADGVVLLAGADDRA
VEALSELPGEFTASQARQALGTSRRVVVPLLELLARAGRTVRGDDGAHRLRAPGGIAPPG
ALP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtgatcgccaccgccgggcacgtcgaccacggcaagtcgacgctggtccgcgcg
ctcaccgggatggagcccgaccgcttcgccgaggagcagcgccgcggcatgaccatcgac
ctggggttcgcctggaccgacctgggcgcggccggcaccgtcgccttcgtcgacgtcccg
ggtcacgagcggttcgtgacgacgatgctcgccggggtggggccggtgccggcggtgctg
ctcgtcgtcgccgccgacgagggctggatgccgcagtcggccgagcacctcgacgcgctc
gtcgccctcggtgtccgcgacgggctgctggtgatcacccgcagcgacctgatggagccc
gacctcgccctcgacgacgcccgcacgcacctcgccggcacgccgctggccgacatcccc
gacgtcgccgtctccgcgctcaccggcgccggcacggacgcgctgcgcaccgcgctcggc
gcgctggccgcccgcctgcccgcccccgacgacgacgccgacgtccggctctgggtcgac
cgcgccttcaccgtgcgcggggccgggaccgtcgtcaccggcacgctgccgggcgggtgc
ctgcgcgccggcgacgagctcgagctcgccggcgaggagggcgtgcgccgggtgaccgtg
cgcgggctgcagagcctgggcgcgcccgtcggcgaggcgcgcggggtgagccgcgtggcg
gtgaacctgcgcggggtcccgcgcgaggccgtcacccgcggtgacgcgctgctggcccgg
ggggcgtggctgcccgtcaccaccctcgacgtgcgcctgcacccgacccgcgacggcacc
gacgacgacctgccgcgcgagctcgtcctgcacatcggctcggccgcggtggccgcccgc
gtccgcccgctgggcgccgacaccgtccggctgcggctgcggcacccgctgccgctgcgc
gtcggcgaccgcgcggtgctgcgcgaccccggacgccgccgcgtgcgcgccgggatcacc
gtcctcgacgtccgcccgcccgagctgcgccgccgcggggcggccgcggcccgcgccgcc
gagctgtccacgatgggcgccgtgcccgacccggccgccgagctgcgccgccggggcgtc
gtgcgcagcgccgacctggccgcgatgggcgtgccggtcgccgggctcggccccgccgcg
ggcgggtggctggtcgacccggagcacgccgcggcggccgcccgcgcgctggccaccgcc
gtcgacgcccacgaccgcgccgaccccctcgaccccgggctgcccaccgaggccgcccgg
cgcgcggccgggctgcccgacgcccgcctgctcgacgccgtgctcgccgccgcccccggc
ctcgcgcaccgcgacgggcgcgtcgcccgcccccgggccggggccctcgcgcccgctctc
gtcaccgcgctggagcggctgcgcgccgacctcgccgacgccccgttcgccgcacccgac
gccgcccggctcgccgagctcggcctcggtccgcgggagctcgccgcgctcgtgcgggcg
ggcgagctgctgcgcgtcgccgacggcgtggtgctcctcgccggggccgacgaccgcgcc
gtcgaggcgctctccgagctgcccggggagttcaccgcgagccaggcgcggcaggcgctc
ggcaccagccgacgggtcgtggtaccgctgctggagctgctggcacgggccgggcgcacc
gtccgcggggatgacggtgcccaccgactgcgcgcccccggtggcatcgcgccccccgga
gccctaccgtga
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