Pseudonocardia broussonetiae: HOP40_02755
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Entry
HOP40_02755 CDS
T07210
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03420
Nucleotide excision repair
pbro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HOP40_02755
03430 Mismatch repair
HOP40_02755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_02755
Enzymes [BR:
pbro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HOP40_02755
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HOP40_02755
MMR (mismatch excision repair)
Other MMR factors
HOP40_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Replic_Relax
Motif
Other DBs
NCBI-ProteinID:
QJY50327
UniProt:
A0A6M6JTF7
LinkDB
All DBs
Position
complement(555781..559191)
Genome browser
AA seq
1136 aa
AA seq
DB search
MLTPRALATALGVDPPTEEQAAVISAPPRPALVVAGAGAGKTETMAARVVWLVATGEVLP
EQVLGLTFTRKAAQQLGTRVRSRLRRLAGSRLLDELDPSGQRRAAVLAGEPTVSTYHAYA
GRLVAEHALRLPAEPAARLLSETAAWQLAHRVVSTWAHDLDIDRVPATVTGYLLSLAGEL
GEHLVGTDAVRVHAERLATALSEAPRGKGQRAEPSQTYKRWIDAQRMRTELLPLVEAFAA
RKRAERAVDFSDQLAIAARVAESHPEVGETERATYRAVLLDEYQDTGHAQRVLLRALFGT
VPGEPVRPDGPSVTAVGDPCQSIYGWRGASAGNLVRFRSDFPAGPDEPADEFGLLTSFRN
PAEVLALANAVSEPLRTAPGAVGVGELRAGSGEVRGDVRVALLPDVATEVGWLADAVAEQ
WTDGRTPSSAVLVRRRADMDAVADALRARGLPVEVVGLGGLLDTPEVRDLVSALKLVSDP
LAGPSAVRLLTGARWRLGVADLAALWARARELVPALPSRRGPLTAAELAMGALPAEQAEQ
AGLVDALDDPGEASRYTAAGHQRIVRLGRELSWLRARASAPLTDLVADAERLLLLDAESA
ARPGPVGRTHLDAFADVVAEFASGAEVATLPALLDYLDTAEQAEDGLTPGDVEVADDRVQ
VLTVHAAKGLEWQVVAVPHLVTQVFPGRKIGGTWLTDPSELPVALRGDAIDLPLLDLPAD
GDRKQLENAVKAHSEALDERRLTEERRLFYVALTRSERVLLVSGHRWPAAGEKPKEPSEF
LVQIAQAVPEAVEQWAEPPEDGAHNPAVVDGPGVPWPLDPLGARSADVHAGAERVRAALA
GLDAARAARADAADPGSQLELLDVPVAAPELVTSPDPDDPGPAEPDDPDEDGIVEEDPEG
WAADVEILLAERAAARARPTVALPAQLTVSQLVELAADPAVLAARLRRPLPLPPNPHTRR
GTAFHAWLEQRFGAAQLLDLDELPGAADEGAADDDALAELQEAYLRSEWAERRPVEVEVP
FETIVAGVGVRGRMDAVFTDPDGGWTVVDWKTGALPDDARLPALSVQLAAYRLAWAALAG
CDPEQVRAAFHYVRADVTLRPADLLDAAGLRALLESVPAAAAPAGGDGHAQALPAR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
ctgctcacgccccgcgccctggccacggccctcggcgtcgacccgcccaccgaggagcag
gccgccgtgatctcggcgccgccgcgccccgcgctcgtcgtcgcgggtgcgggcgcgggc
aagaccgagacgatggccgcgcgcgtggtctggctcgtcgccaccggtgaggtgctgccc
gagcaggtgctcggcctcacgttcacgcgcaaggcggcgcagcagctcggcacgcgggtg
cggtcgcggctgcggcgcctggccggctcccggctgctcgacgagctcgacccgagcggg
cagcgccgcgcggcggtcctggccggcgagccgacggtgtccacctaccacgcctacgcc
gggcgcctcgtcgccgagcacgccctgcgcctgcccgccgagcccgcggcccgcctgctc
agcgagacggcggcgtggcagctcgcgcaccgggtcgtcagcacctgggcccacgacctc
gacatcgaccgcgtgcccgccaccgtcaccggctacctcctctccctcgccggcgagctc
ggcgagcacctcgtcggcaccgacgcggtccgcgtgcacgccgagcggctggccacggcg
ctgtcggaggcgccgcggggcaaggggcagcgggccgagccgtcgcagacctacaagcgc
tggatcgacgcccagcgcatgcgcaccgagctgctgccgctggtggaggcgttcgcggcg
cgcaagcgcgcggagcgggccgtcgacttctccgaccagctcgccatcgccgcccgcgtc
gccgagagccaccccgaggtcggcgagaccgagcgcgccacctaccgcgcggtgctgctc
gacgagtaccaggacaccggccacgcccagcgcgtgctgctgcgcgcgctgttcggcacc
gtgccgggcgagccggtgcgccccgacgggccctcggtcacggccgtcggcgacccctgc
cagtcgatctacggctggcgcggcgcgagcgcgggcaacctcgtgcgcttccgctcggac
ttccccgccgggccggacgagcccgccgacgagttcggcctgctcaccagcttccgcaac
ccggccgaggtgctggcgctggccaacgccgtgtccgagccgctgcgcaccgcgcccggc
gcggtcggggtcggcgagctgcgcgccgggtcgggcgaggtgcggggcgacgtgcgggtg
gcgctgctgcccgacgtcgccacggaggtgggctggctggccgacgccgtcgccgagcag
tggaccgacgggcgcacgcccagctccgcggtgctcgtgcggcgccgcgccgacatggat
gccgtcgccgacgccctgcgcgcccgcgggctgccggtggaggtcgtcgggctgggtggg
ctgctcgacacgccggaggtccgcgacctggtcagcgcgctgaagctggtgtccgacccg
ctcgccgggccgtcggcggtccgcctgctcaccggggcccgctggcgcctgggcgtcgcc
gacctcgccgccctgtgggcccgcgcccgcgagctcgtgcccgcgctgcccagccgccgc
ggcccgctcaccgccgccgagctggcgatgggcgcgctgcccgcggagcaggccgagcag
gcgggcctggtcgacgcgctcgacgacccgggcgaggcctcccgctacaccgcggccggg
caccagcggatcgtgcggctggggcgcgagctgagctggctgcgggcgcgggcgtcggcg
ccgctcaccgacctcgtcgccgacgccgagcggctcctgctcctcgacgccgagtcggcc
gcccgccccggcccggtcggccgcacgcacctcgacgcgttcgccgacgtcgtcgccgag
ttcgcgtccggcgccgaggtcgccacgctgcccgcgctgctcgactacctcgacaccgcc
gagcaggccgaggacgggctcacgccgggcgacgtcgaggtcgccgacgaccgcgtccag
gtgctcacggtgcacgcggccaagggcctggagtggcaggtcgtggccgtgccgcacctc
gtcacccaggtcttcccgggccgcaagatcggcgggacgtggctgaccgacccgtcggag
ctgccggtggcgctgcgcggcgacgcgatcgacctgcccctgctcgacctgcccgccgac
ggcgaccgcaagcagctcgagaacgcggtcaaggcccactccgaggccctcgacgagcgc
cggctcaccgaggagcggcggctgttctacgtcgcgctcacccgcagcgagcgggtgctg
ctggtgtccgggcaccgctggcccgcggcgggggagaagcccaaggagccctcggagttc
ctggtgcagatcgcgcaggcggtgcccgaagccgtcgagcagtgggccgagccgccggag
gacggcgcgcacaaccccgccgtcgtcgacggtcccggggtgccgtggccgctcgacccc
ctgggcgcccggtcggccgacgtgcacgccggcgccgagcgggtccgggccgcgctcgcc
gggctcgacgcggcccgggccgctcgcgccgacgccgccgatccgggctcccagctggag
ctgctcgacgtgcccgtcgccgctccggagctggtcaccagcccggatcccgacgacccc
gggcccgcggagcccgacgacccggacgaggacgggatcgtcgaggaggaccccgagggc
tgggccgccgacgtcgagatcctgctggccgagcgcgccgccgcccgcgcccgcccgacg
gtcgcgctgcccgcgcagctcaccgtcagccagctcgtcgagctcgccgccgacccggcc
gtgctcgccgcccggctgcgccgcccgctgccgctcccgcccaacccgcacacccgccgc
ggcaccgcgttccacgcctggctggagcagcgcttcggcgccgcccagctgctcgacctc
gacgagcttcccggtgcggccgacgagggcgccgccgacgacgacgcgctcgccgagctg
caggaggcctacctgcgcagcgagtgggccgagcggcggccggtcgaggtggaggtgccg
ttcgagacgatcgtcgccggggtcggtgtgcgcgggcggatggacgcggtgttcaccgac
ccggacggcggctggaccgtcgtcgactggaagaccggcgcgctccccgacgacgcgcgg
ctcccggcgctgtcggtgcagctcgcggcgtaccggctggcgtgggcggcgctggccggg
tgcgaccccgagcaggtgcgggcggcgttccactacgtccgcgccgacgtcacgctccgc
cccgccgacctcctcgacgccgccgggctgcgggcgctgctggagtcggtgccggcagcg
gcggctccagcgggcggcgacggccacgcccaggcgcttcccgcgcgctga
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