Pseudonocardia broussonetiae: HOP40_03685
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Entry
HOP40_03685 CDS
T07210
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HOP40_03685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_03685
Enzymes [BR:
pbro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HOP40_03685
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HOP40_03685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TAF1C_HB
Motif
Other DBs
NCBI-ProteinID:
QJY45039
UniProt:
A0A6M6JF98
LinkDB
All DBs
Position
complement(750052..750765)
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AA seq
237 aa
AA seq
DB search
MDAAGFSSVAELDAALVDCRACPRLVEWRERVAREKRAAYRDEEYWGRPVPGIGPADASL
LVVGLAPAAHGGNRTGRMFTGDRSGDVLFAALHAVGLTNQPTAVHRDDGLTLHGVRITAP
VHCAPPDNKPTPAERDTCSGWLRAELALLRPRAVVALGGFGWQALLPVLGSVGWTIPRPR
PVFGHGARVELAGPWPLQLFGSYHVSQQNTFTGRLTPAMLEDVLRAAAEAAGAAPIH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccgccgggttctccagcgtcgcggagctggacgcggcgctcgtcgactgccgg
gcctgcccgcgcctggtcgagtggcgcgagcgggtggcccgggagaagcgcgcggcctac
cgcgacgaggagtactggggccgcccggtgcccggcatcgggccggccgacgcgtcgctg
ctggtcgtcgggctggcgccggctgcgcacggcggcaaccgcacggggcgcatgttcacc
ggcgaccgctccggcgacgtcctgttcgccgcgctgcacgccgtcggcctgaccaaccag
cccaccgccgtgcaccgcgacgacggcctgaccctgcacggcgtccgcatcaccgcgccg
gtgcactgcgcgccgccggacaacaagcccacccccgccgagcgcgacacctgcagcggc
tggctgcgcgccgagctcgccctgctgcgcccgcgcgcggtggtcgcgctgggaggtttc
ggctggcaggcgctgctgcccgtcctgggctcggtgggctggacgatcccgcggccccga
ccggtgttcgggcacggggcgcgcgtcgagctggccgggccgtggccgctgcagctgttc
ggcagctaccacgtcagccagcagaacacgttcaccggacggctcacgcccgcgatgctg
gaggacgtcctgcgggcggcggccgaggccgccggtgccgccccgattcactga
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