Pseudonocardia broussonetiae: HOP40_12315
Help
Entry
HOP40_12315 CDS
T07210
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HOP40_12315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbro03021
]
HOP40_12315
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_12315
Enzymes [BR:
pbro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HOP40_12315
Transcription machinery [BR:
pbro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HOP40_12315
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HOP40_12315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QJY46498
UniProt:
A0A6M6JEW3
LinkDB
All DBs
Position
2471824..2472873
Genome browser
AA seq
349 aa
AA seq
DB search
MLISQRPTLAEDSVVDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGPVTAGDIVPPAGVTVHN
PDLHIATLNDKGRLEVELVVERGRGYVPAMQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVLDVETKPSITPRDALASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAFAMPIEELDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPSAAAAEYGSDGGYDADQPFGDDGQDYAETEQL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgccccaccctggccgaggactcggtcgtcgacacccgctcccgg
ttcgtcatcgagccgctggagcccggtttcggctacacgctgggcaactcgctccggcgc
acgctgctgtcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggcgtcctg
cacgagttcacgaccgtcccgggggtgaaggaggacgtcaccgacatcatcctgaacctc
aaggagctggtcgtgtcctccgaggaggacgagccggtcacgatgtacctgcgcaagcag
ggccccggcccggtcacggcgggcgacatcgtcccgcccgccggcgtcaccgtgcacaac
ccggacctgcacatcgccacgctcaacgacaagggccgcctcgaggtggagctcgtcgtc
gagcggggtcgtggctacgtcccggccatgcagaacaaggccaccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcaaggtgacctacaaggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgacaagctggtgctcgacgtcgagacgaagccc
tcgatcaccccccgcgacgcgctggcctcggccggcaagacgctggtggagctgttcggc
ctcgcgcgcgagctgaacgtcgacgccgagggcatcgagatcggcccgtcgccgcaggag
gccgacaccatcgccgccttcgcgatgccgatcgaggagctcgacctcacggtccgctcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcgtcggccgcagcgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaagatgaag
ctcgtcggcctcgggctcgcgctcaaggacagcccgcccggattcgacccgtcggccgcg
gccgccgagtacggctccgacggcggttacgacgccgaccagccgttcggcgacgacggc
caggactacgcagaaacggagcagctgtag
DBGET
integrated database retrieval system
