Pseudonocardia broussonetiae: HOP40_12565
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Entry
HOP40_12565 CDS
T07210
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03420
Nucleotide excision repair
pbro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HOP40_12565 (pcrA)
03430 Mismatch repair
HOP40_12565 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_12565 (pcrA)
Enzymes [BR:
pbro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HOP40_12565 (pcrA)
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HOP40_12565 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HOP40_12565 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF1465
Motif
Other DBs
NCBI-ProteinID:
QJY46542
UniProt:
A0A6M6JIL5
LinkDB
All DBs
Position
2520608..2522944
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AA seq
778 aa
AA seq
DB search
MSALFELPQETVTEPRTARGRTLLEGLNPRQREAVVHAGSPLLIVAGAGSGKTRVLTHRI
AWLLAERDVHPGEIMSITFTNKAAAEMKERVDALVGRRGNAMWVSTFHSMCVRILRREAS
HLGVRSAFSVYDADDSRRLIGMITRDLGTDPKKYAPRAVAAQISNLKNELLSADDAAERA
TNDHERKVAEVYGVYQARLRTANAFDFDDLIMETVALLQRLPAVAEYYRRRFRHVLVDEY
QDTNHAQYALVRELVAPAAPGARPGELCVVGDSDQSIYAFRGANIRNIVEFEQDFPDART
ILLEQNYRSTQTILTAANTVIARNPDRRDKRLWSEQGDGEKVVGYVADNEHDEAAFVAAE
IDRLVDSGDYRNSDIAVFYRTNSQSRVFEGVFARVGMAYKIVGGVRFYERMEVRDALAYL
RVLSNPEDTVSLRRILNVPKRGIGDKAEDTVAAFADRERISFAAALRIVAEQPERVPGLV
TRSQRAIGGFVRMLDELDELVARGEETAELLEAVYAKTGYTAELEASEDPQDGSRLDNLA
ELVTVAREFAGDVAAADPDASDVEVGAPEPGSLAAFLERVALVADADSIPDDDQGMVTLM
TLHTAKGLEFPVVFLTGWEDGVFPHMRAMGDPAELAEERRLAYVGITRARERLYLSRAMI
RSAFGQPNANPASRFLAEVPEGLVDWRRAEPERSAPVGRFGFGRRSTATDRGTWNVPKAS
MAPTLSLDVGDRVNHDKYGLGTVVASDGSGARATVTIDFGSSGTVRLMLIGGVPMQKL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgttcgaactgccccaggagaccgtcaccgagccccgcaccgcccggggc
cggaccctgctggagggtctcaacccgcgccagcgcgaggccgtcgtgcacgcggggtcg
ccgctgctgatcgtcgcgggcgcggggtcgggcaagacccgggtactcacccaccgcatc
gcctggctgctggccgagcgcgacgtgcaccccggcgagatcatgtcgatcacgttcacc
aacaaggccgcggccgagatgaaggagcgggtcgacgcgctggtggggcgccgcggcaac
gcgatgtgggtgtcgacgttccactcgatgtgcgtgcggatcctgcggcgcgaggcgtcg
cacctgggcgtgcgcagcgcgttctccgtctacgacgccgacgactcccgtcggctgatc
gggatgatcacgcgcgacctcgggacggaccccaagaagtacgcgccgcgcgcggtcgcg
gcgcagatctccaacctcaagaacgagctcctctccgccgacgacgccgcggagcgcgcc
accaacgaccacgagcgcaaggtggccgaggtctacggcgtctaccaggcgcggctgcgc
acggccaacgccttcgacttcgacgacctgatcatggagacggtcgcgctgctccagcgg
ctgcccgccgtcgcggagtactaccgccgccggttccgccacgtcctcgtcgacgagtac
caggacaccaaccacgcgcagtacgcactggtgcgcgagctggtggcgcccgccgcgccg
ggcgcgcgcccgggcgagctgtgcgtcgtcggcgactccgaccagtcgatctacgccttc
cgcggcgccaacatccgcaacatcgtggagttcgagcaggacttccccgacgcgcgcacg
atcctgctggagcagaactaccgctccacgcagacgatcctcacggcggccaacaccgtc
atcgcccgcaacccggaccgccgcgacaagcgcctgtggtccgagcagggcgacggcgag
aaggtcgtcgggtacgtcgccgacaacgagcacgacgaggcggcgttcgtcgcggccgag
atcgaccggctcgtcgactccggcgactaccgcaactccgacatcgccgtgttctaccgg
accaactcccagtcgcgcgtcttcgagggcgtgttcgcccgcgtcgggatggcgtacaag
atcgtcggcggcgtccgcttctacgagcggatggaggtgcgcgacgcgctggcctacctg
cgggtgctgtccaaccccgaggacacggtgagcctgcggcgcatcctcaacgtgcccaag
cgcggcatcggcgacaaggccgaggacaccgtggcggccttcgccgaccgcgagcgcatc
tcgttcgccgcggcgctgcggatcgtcgccgagcagcccgagcgcgtccccggcctggtc
acgcgctcgcagcgggcgatcggcggattcgtccggatgctcgacgagctcgacgagctc
gtggcccgcggggaggagaccgccgagctgctggaggcggtctacgcgaagaccggctac
accgccgagctcgaggccagcgaggacccgcaggacgggtcgcgcctggacaacctcgcc
gagctggtcacggtggcgcgggagttcgcgggcgacgtcgccgcggccgacccggacgcc
tccgacgtggaggtcggcgcccccgagcccggctcgctggccgcgttcctggagcgcgtg
gcgctggtcgccgacgccgactccatccccgacgacgaccagggcatggtcacgctgatg
acgctgcacacggcgaaggggctggagttccccgtcgtgttcctcaccggctgggaggac
ggcgtcttcccgcacatgcgcgccatgggcgacccggccgagctggccgaggagcggcgg
ctggcctacgtgggcatcacgcgcgcccgggagcggctctacctgtcccgcgcgatgatc
cgctcggcgttcggccagcccaacgccaacccggcgtcgcggttcctggcggaggtgccc
gaggggctggtcgactggcggcgcgccgagcccgagcgctcggccccggtgggccgcttc
ggcttcggccggcgcagcaccgccaccgaccgcggcacgtggaacgtcccgaaggcgtcg
atggcgcccacgctgagcctcgacgtgggcgaccgcgtcaaccacgacaagtacgggctg
ggcacggtcgtcgcgtccgacggcagcggcgcgcgggccaccgtcacgatcgacttcggc
agctccggcaccgtgcggctcatgctgatcggcggcgtgccgatgcagaagctgtag
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integrated database retrieval system
