KEGG   Pseudonocardia broussonetiae: HOP40_17065
Entry
HOP40_17065       CDS       T07210                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pbro  Pseudonocardia broussonetiae
Pathway
pbro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HOP40_17065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbro03019]
    HOP40_17065
Messenger RNA biogenesis [BR:pbro03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HOP40_17065
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QJY47305
UniProt: A0A6M6JJE3
LinkDB
Position
3452370..3454154
AA seq 594 aa
MSRPPARSDRNRSDRRSRPPRRDQNRPPAVVEATQPGLPTQPPGPLPEGALRVLTLGGIG
EIGRNMTVFEYDGRLLVVDSGVLFPDADAPGVDLILPDFRPILDRLGDIDALVLTHGHED
HIGAVPFLLRQRPDLLIVGSPFTLALVAAKCKEHRLTPHMLVVNEGDRLRHGTFECEYFA
VAHSIPQCLAVAIRTPAGVVLHTGDIKLDQLPLDGRLTDLPGFSRLGDEGVDLFLCDSTN
ADVPGVSPSEASLGPAIAQAIGQASGRAFVACFASNVHRVQQIIDGAVLHGRRVCLIGRS
MLRNMEIATDLELLSVPEGVMVALDDVEEVPEDKLLVVCTGSQGEPMAALSRIARGEHRT
FQMRSTDTVILSSSLIPGNEHAVFGVVNRLRRAGIQVIDNRNANVHVSGHAFAGELLFLY
NAVRPSNVMPVHGEWRHLRANAALAEKTGVAHDAVVVTENGITVDLVDGRAVISGRVEVG
RAYVDGVATGDIEQPTLADRIVLGEGGFISITVAIDATTGRAVAPPTLSGRGFSEDPKAL
EAVLPIVEQELARTGSDGIVDTHRVAQQVRRVVGKWVGETYRRRPMIVPTVIAV
NT seq 1785 nt   +upstreamnt  +downstreamnt
ttgagccgtccccctgcacggtccgaccgcaacaggtccgaccgtcggtcccgcccgccc
cggcgcgaccagaaccgacccccggccgtcgtcgaagccacccagcccggcctgcccacg
caacccccgggcccgctgcccgagggcgcgctgcgcgtgctcaccctgggcggcatcggc
gagatcggccgcaacatgaccgtcttcgagtacgacggccgcctgctcgtcgtcgactcc
ggggtgctgttccccgacgccgacgcccccggcgtcgacctgatcctgcccgacttccgc
cccatcctcgaccgcctcggcgacatcgacgcgctcgtgctcacccacggccacgaggac
cacatcggcgcggtgccgttcctgctgcgccagcgccccgacctgctgatcgtcgggtcg
ccgttcacgctcgcgctggtggcggccaagtgcaaggagcaccgcctcaccccgcacatg
ctggtcgtcaacgagggcgaccgcctgcgccacggcacgttcgagtgcgagtacttcgcc
gtcgcgcactcgatcccgcagtgcctcgcggtcgcgatccgcacgccggccggcgtcgtc
ctgcacaccggcgacatcaagctcgaccagctcccgctcgacgggcgcctcaccgacctg
cccggcttctcgcgcctgggcgacgagggcgtcgacctgttcctgtgcgactccaccaac
gccgacgtgcccggggtgtcgccctcggaggcctcgctcggcccggccatcgcgcaggcg
atcggccaggcgtcggggcgtgcgttcgtggcgtgcttcgcctccaacgtgcaccgcgtg
cagcagatcatcgacggcgcggtgctccacggccgtcgcgtgtgcctgatcgggcgctcg
atgctgcgcaacatggagatcgccaccgacctcgagctgctgtcggtgcccgagggcgtc
atggtcgcgctcgacgacgtcgaggaggtgcccgaggacaagctgctcgtcgtgtgcacc
gggtcgcagggcgagccgatggcggcgctgtcgcggatcgcgcgcggcgagcaccgcacg
ttccagatgcgctcgaccgacaccgtcatcctgtccagctcgctcatcccgggcaacgag
cacgccgtgttcggcgtggtcaaccggctgcgccgcgcgggcatccaggtgatcgacaac
cgcaacgccaacgtgcacgtctccgggcacgcgttcgcgggggagctgctgttcctctac
aacgcggtgcgcccgagcaacgtcatgccggtgcacggcgagtggcgccacctgcgcgcc
aacgccgcgctggccgagaagaccggtgtcgcgcacgacgccgtcgtcgtcaccgagaac
gggatcaccgtcgacctcgtcgacggccgcgccgtgatctccgggcgcgtcgaggtgggc
cgggcctacgtcgacggcgtcgccaccggcgacatcgagcagcccacgctggccgaccgc
atcgtgctgggcgagggcggcttcatctccatcaccgtggccatcgacgccaccaccggc
cgggccgtcgccccgccgacgctgtccgggcgcgggttctccgaggacccgaaggcgctg
gaggccgtgctgccgatcgtcgagcaggagctggcccgcaccggcagcgacgggatcgtc
gacacccaccgcgtggcccagcaggtgcgccgggtcgtcgggaagtgggtgggggagacc
taccgccgccgcccgatgatcgtgcccacggtcatcgccgtctga

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