Pseudonocardia broussonetiae: HOP40_30255
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Entry
HOP40_30255 CDS
T07210
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03030
DNA replication
pbro03430
Mismatch repair
pbro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HOP40_30255 (dnaE)
03430 Mismatch repair
HOP40_30255 (dnaE)
03440 Homologous recombination
HOP40_30255 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbro03032
]
HOP40_30255 (dnaE)
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_30255 (dnaE)
Enzymes [BR:
pbro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HOP40_30255 (dnaE)
DNA replication proteins [BR:
pbro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HOP40_30255 (dnaE)
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HOP40_30255 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QJY49514
UniProt:
A0A6M6JN74
LinkDB
All DBs
Position
complement(6226509..6230057)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSGSGDSFVHLHTHTEFSMLDGAARLDDLFKEAARMEMPALAMTDHGNVFGAYEFWRKAK
AAGVKPIIGMEGYLAPGSRHERKRAVLARGASGADDTDNPGEMYTHMTLLAENNEGMHNL
FRLSSLASLEGYYYKPRMDRELLETYGKGIIATTGCPSGEVQRLLQQDKYDAAVQAASDY
RDIFGKDNFFCELMDHGIEIERRVRDDLHRLKKQLELPGLATNDLHYTYAEDAKPHEVLL
CVQTGKTLADPNRFKFDAQDFYLKSPAEMRAQWDDAFPEACDNTLAIAERVDVHFTEGQD
LMPRAPVPEGESEESWLVKEVERGMHNRFPNGITDQYRTQVDYEVGVIIQMGFPGYFLVT
ADLIQHAKKVGIRCGPGRGSAAGSLVAYALGITDLDPIHHKLLFERFLNPERISMPDIDM
DFDERRRGEMIRYTTEKYGEDRIAQIITYSTIKAKAAIKDSARVLFGQPGYAVADRITKA
MPPAIMGKDIPLSGVFDPTHKRYSEATEVRALYDVDPQVKEIIDTARGLEGLKRQWGVHA
AGVIMSSKPLIDVIPIQRREADGAIITQFDMGACETLGLLKMDFLGLRNLTIIDDALENI
ELNGKPKLVIEDVGLDDPKTYELLSKGETLGVFQLDGGPMRDLLRRMAPTEFDDISAVGA
LYRPGPMGANAHNDYADRKNGRQPVTPIHPELEEPLKEVLGETYGLIVYQEQVMAIAQVL
AGYTLGKADLLRRAMGKKKKEILDKEYAGFAQGMKDNGYSAAAVKTLWDILLPFSDYAFN
RAHSAAYGVVSYWTAYLKANYPAEYMSGVLTSVRDDKDKAAVYLAECRRMGITVLAPDVN
ESVRNFAPVGTDIRFGLGGIRNVGVNVVDAIVKARKEKGDFTDFSDFLRKVDAVVCNKKV
IESLIKAGAFDSLGHTRKGLLLVHADAIDAVMSTKKAASMGQFDLFGSMDGSGPSELDSV
FDVKVSDDEWDTKHKLAVEREMLGLYVSGHPLHGVESVLTAKTDTPISAIVEGTVPDGHQ
VTVGGILAGVNRRVNKNGEPWASAQLEDLAGGIEVLFFPRCYQVVGVDVAEDAIVLLKCR
VNRRDDRVSLIVNDLAVPDLTVANGGPAAPVKVSMRTELVTPQRVSRLKEVLSHHPGSSE
VHLALVGGSGTKVWKLDDGLKVTQSSALMGDLKALLGPGCLG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttccggcgacagcttcgtccacctccacacccacaccgagttctcgatgctc
gacggggccgcgcggctggacgacctgttcaaggaagccgcgcggatggagatgcccgcg
ctggcgatgaccgaccacggcaacgtgttcggcgcctacgagttctggcgcaaggccaag
gccgcgggcgtcaagccgatcatcggcatggagggctacctcgccccgggcagccgccac
gagcgcaagcgcgccgtgctggccaggggcgcgtcgggggcggacgacaccgacaacccc
ggcgagatgtacacccacatgacgctgctggccgagaacaacgaggggatgcacaacctc
ttccggctctcgtcgctggcctcgctcgagggctactactacaagccccgcatggaccgc
gagctgctggagacctacggcaaggggatcatcgccaccaccggctgcccctccggcgag
gtccagcggctgctgcagcaggacaagtacgacgccgccgtccaggccgcgagcgactac
cgcgacatcttcggcaaggacaacttcttctgcgagctgatggaccacggcatcgagatc
gagcgccgcgtccgcgacgacctgcaccggctcaagaagcagctcgagctgccgggcctc
gccacgaacgacctgcactacacctacgccgaggacgcgaagccgcacgaggtgctgctg
tgcgtgcagaccggcaagaccctcgccgaccccaaccggttcaagttcgacgcccaggac
ttctacctcaagagcccggccgagatgcgggcccagtgggacgacgccttcccggaggcg
tgcgacaacaccctcgcgatcgccgagcgggtcgacgtccacttcaccgaggggcaggac
ctcatgccccgggcgcccgtgcccgagggcgagtcggaggagagctggctggtcaaagag
gtcgagcgggggatgcacaaccgcttcccgaacggcatcaccgaccagtaccgcacgcag
gtcgactacgaggtcggcgtcatcatccagatgggcttcccgggctacttcctggtcacg
gccgacctgatccagcacgcgaagaaggtcggcatccgctgcggccccggccgcgggtcc
gccgccggctcgctcgtcgcgtacgccctgggcatcaccgacctcgacccgatccaccac
aagctgctcttcgagcggttcctcaaccccgagcgcatctcgatgcccgacatcgacatg
gacttcgacgagcgccggcgtggcgagatgatccgctacaccacggagaagtacggcgag
gaccggatcgcgcagatcatcacctactccacgatcaaggcgaaggccgcgatcaaggac
tcggcgcgcgtgctgttcgggcagcccggctacgccgtcgccgaccggatcaccaaggcg
atgccgcccgcgatcatgggcaaggacatcccgctctcgggcgtgttcgaccccacgcac
aagcgctactccgaggccaccgaggtccgcgcgctctacgacgtcgacccgcaggtcaag
gagatcatcgacaccgcccggggcctggagggcctcaagcggcagtggggcgtgcacgcg
gcgggcgtgatcatgtcgagcaagccgctgatcgacgtcatcccgatccagcgccgcgag
gccgacggcgccatcatcacgcagttcgacatgggcgcctgcgagacgctcgggctgctc
aagatggacttcctgggcctgcgcaacctcacgatcatcgacgacgcgctggagaacatc
gagctcaacggcaagccgaagctcgtcatcgaggacgtcgggctcgacgacccgaagacc
tacgagctgctgtccaagggcgagacgctcggggtgttccagctcgacggcggcccgatg
cgcgacctgctgcgccgcatggcgcccaccgagttcgacgacatctccgcggtcggcgcg
ctgtaccgccccggcccgatgggcgccaacgcgcacaacgactacgccgaccgcaagaac
gggcggcagccggtcacgccgatccaccccgagctggaggagccgctcaaggaggtgctc
ggcgagacctacggcctgatcgtctaccaggaacaggtcatggcgatcgcgcaggtcctg
gccggctacacgctcggcaaggccgacctgctgcgccgcgcgatgggcaagaagaagaag
gagatcctcgacaaggagtacgccggcttcgcgcagggcatgaaggacaacggctactcc
gcggccgcggtcaagacgctctgggacatcctgctcccgttctccgactacgccttcaac
cgcgcgcactccgccgcctacggcgtcgtctcctactggacggcgtacctcaaggccaac
tacccggccgagtacatgtccggcgtgctcacgtcggtgcgcgacgacaaggacaaggcc
gcggtctacctggccgagtgccgccgcatgggcatcacggtgctcgcgcccgacgtcaac
gagtcggtccgcaacttcgcgcccgtcggcaccgacatccggttcggcctgggcggcatc
cgcaacgtcggcgtcaacgtcgtcgacgcgatcgtcaaggcccgcaaggagaagggcgac
ttcaccgacttctccgacttcctgcgcaaggtcgacgccgtcgtctgcaacaagaaggtc
atcgagtcgctgatcaaggcgggcgcgttcgactcgctcgggcacacccgcaagggcctg
ctgctcgtgcacgccgacgcgatcgacgccgtgatgagcaccaagaaggccgcgtcgatg
ggccagttcgacctgttcgggtcgatggacgggtcgggcccctccgagctcgactcggtg
ttcgacgtcaaggtctccgacgacgagtgggacaccaagcacaagctcgccgtcgagcgc
gagatgctcggcctctacgtgtccgggcacccgctgcacggcgtcgagtcggtgctgacg
gcgaagaccgacaccccgatctcggcgatcgtcgagggcacggtgcccgacggccaccag
gtcaccgtcggcggcatcctcgccggggtcaaccggcgggtgaacaagaacggcgagccg
tgggcgtcggcgcagctggaggacctcgcgggcgggatcgaggtcctgttcttcccgcgc
tgctaccaggtggtcggcgtcgacgtcgcggaggacgcgatcgtgctgctcaagtgccgg
gtcaaccggcgcgacgaccgcgtgtccctgatcgtcaacgacctcgcggtgcccgacctc
accgtcgccaacggcggtccggcggccccggtgaaggtgagcatgcgcaccgagctcgtc
accccgcagcgggtgtcgcggctcaaggaggtgctctcgcaccaccccggcagctccgag
gtgcacctcgcgctggtcgggggcagcggcacgaaggtctggaagctcgacgacgggctg
aaggtcacccagtcctcggcgctgatgggcgacctgaaggccctgctcgggccgggctgc
ctgggctga
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integrated database retrieval system
