Pseudonocardia broussonetiae: HOP40_31995
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Entry
HOP40_31995 CDS
T07210
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HOP40_31995 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_31995 (recD)
Enzymes [BR:
pbro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HOP40_31995 (recD)
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HOP40_31995 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
UvrD-helicase
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
AAA_16
TraI_hel_assoc_N
nSTAND3
AAA_29
MukB
DEAD
SLFN-g3_helicase
SRP54
AAA_28
AAA
AAA_24
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
QJY44423
UniProt:
A0A6M6JB95
LinkDB
All DBs
Position
6614927..6616801
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AA seq
624 aa
AA seq
DB search
MTVPAAPVPVAAAPVPAPVLTPAEADPHDARLVLGGSGLLAVFNAAGVLDAADVHTAQRV
GRLGGESDEAVLLAVALAVRAVRLGSVCVDLAAADRTVLGEGDELLDVSALPWPEPGAWH
AACLAGPLVADGADAPAGRPLRMVAGQLYLERYWREEELVRLSLRERAAAAPPAHDLAAL
RAGLDALFPDPLALRQRQAAAVASLRRVTVLAGGPGTGKTTTVAALLTLLLDQPGPSPRI
ALAAPTGKAAARLQEAVAERLSPAHRERVAEASTLHRLLGWRPGGGSGAFRHDRTLRLPY
DVVVVDETSMVSLTMMARLLDAVRPEARLVLVGDPDQLASVEAGAVLGDLARAAGRPEPA
LDSALAALAVPTGVVHGVVTLDHVWRFDGAIAELARAVQAGDAERALAVLRRGDPALAFT
DDDGPAAVEGARADVVAAGRALADAARAGDVDAAVAGLDAHRVLCAHRRGPYGVARWTLD
VDRWLGHGGAAREPWWPGRAVLVTTNDYDAGLFNGDTGVAVTTPDGLRVAFARGGPPTLF
APSRLSEVTGVHAMTVHRGQGSQFTRVTVVLPPAESPLLTRELLYTAVTRAKDFVRVVGT
ADAVRAAVERPVARASGLRHRLDS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtccccgccgcccctgtccccgtcgccgccgcccccgtgcccgccccggtcctc
acgcccgccgaggccgacccgcacgacgcccgcctggtgctcggggggtcgggcctgctc
gcggtgttcaacgccgccggcgtcctcgacgccgccgacgtccacaccgcgcagcgggtc
gggcggctcggcggcgagtccgacgaggcggtgctgctcgccgtcgcgctggccgtgcgg
gcggtgcggctggggtcggtctgcgtcgacctcgccgcggccgaccgcaccgtcctgggc
gagggcgacgagctcctcgacgtctcggccctgccctggcccgagcccggcgcgtggcac
gccgcctgcctggccgggccgctggtggccgacggcgccgacgccccggccgggcgcccg
ctgcggatggtcgccgggcagctctacctggagcgctactggcgcgaggaggagctcgtg
cggctctccctgcgcgagcgggccgccgccgcgccgcccgcgcacgacctcgccgcgctg
cgcgccggcctcgacgcgctgttccccgacccgctcgcgctgcgccagcgccaggccgcc
gccgtggcgtcgctgcggcgcgtcaccgtgctcgccggcggcccgggcaccggcaagacc
accaccgtcgcggcgctgctgacgctgctgctcgaccagcccggcccgtcgccgcgcatc
gcgctggccgcacccaccggcaaggccgcggcccggctgcaggaggcggtcgccgagcgc
ctgtcccccgcgcaccgcgagcgggttgccgaggcctccacgctgcaccggctgctgggc
tggcggcccggcggcggctccggggcgttccggcacgaccgcacgctccggctgccctac
gacgtggtcgtcgtcgacgagacgtcgatggtgtcgctgacgatgatggcgcggctgctc
gacgcggtgcgccccgaagcccgcctcgtgctggtcggcgaccccgaccagctcgcctcg
gtcgaggccggtgcggtgctgggcgacctcgcgcgcgccgcgggccgccccgagcccgcc
ctcgacagcgcgctcgccgcgctcgccgtccccaccggcgtggtgcacggcgtcgtcacc
ctcgaccacgtctggcgcttcgacggcgccatcgccgagctcgcccgcgcggtgcaggcg
ggcgacgccgagcgcgcgctggccgtcctgcgccgcggcgatccggcgctcgcgttcacc
gacgacgacggcccggcggccgtcgagggagcgcgggccgacgtcgtcgcagccggccgt
gcgctcgccgacgccgcgcgcgccggtgacgtcgacgccgcggtcgccggtctcgacgcc
caccgcgtgctgtgcgcgcaccgccgcggcccgtacggggtggcgcgctggaccctcgac
gtcgaccgctggctcggccacggcggcgccgctcgcgagccctggtggcccggccgcgcg
gtgctggtcaccaccaacgactacgacgccggcctgttcaacggcgacaccggcgtcgcc
gtcaccacccccgacggcctgcgcgtggccttcgcccgcggcggcccgcccaccctgttc
gccccgtcgcggctgtcggaggtcaccggcgtgcacgcgatgaccgtgcaccgcgggcag
ggcagccagttcacgcgcgtcaccgtggtcctgccgcccgccgagtcgcccctgctcacc
cgcgagctcctctacaccgcggtcacccgcgccaaggacttcgtgcgggtggtgggcacc
gccgacgccgtgcgggcggcggtggagcggccggtcgcccgggcgagtgggctgcggcac
cggctcgactcctga
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