Pseudonocardia broussonetiae: HOP40_33310
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Entry
HOP40_33310 CDS
T07210
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pbro
Pseudonocardia broussonetiae
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbro03000
]
HOP40_33310
Transcription factors [BR:
pbro03000
]
Prokaryotic type
Helix-turn-helix
Other families
HOP40_33310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Sigma54_activ_2
Sigma54_activat
AAA_16
AAA_22
Xre-like-HTH
HTH_23
HTH_7
HTH_28
nSTAND3
HTH_30
HTH_29
AAA_5
AAA_28
HTH_17
AAA_18
AAA
HTH_50
BrxC_BrxD
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QJY50044
UniProt:
A0A6M6JPT1
LinkDB
All DBs
Position
complement(6900854..6902530)
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AA seq
558 aa
AA seq
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MRSGVERVGVEIPGGPGIDRPVRLLRSAEPVIERLGRRLEGQPLVIILADAEARVVALRA
CRAEVRDWCDCLHIVPGCRLAEETIGTNAIGCAVEERRPFVVVGPEHYRVNLQGFSARAV
PVRHPVTGVLKGVLALACRTEDDSVLMLPLVEDAAARIETDLGDDATRLERRLLDRFLQI
TRRSTAAVVCLNRDLLISSTLAGPLVSPVDQPFLWDWASRKLADRDEYCGELRLSGSVVV
QARCTTVREDDQEAGILIEMRPGPATLTAVGARRPVTSGTTGEGPVPGRSAAAERVRREL
TAVARSQGPILITGEPGTGKAFLARHLHDRTGLPGTVTVLETGQCIDDPLAWFERLRAAL
AIPGTLVLRQIDELPVEFAPRAVGLVERADGHPIQVIATARLTNGEDAMTRLRDCFPARL
QLPPLRKRAEDVADIARVLVRDLTRRSPVPRLEPATVQNLMGQVWPGNIRELRAVLSSAL
LRSVRRDIAIEHLPPEYRSAPIRHRLTSLQRVEREALLNALEDSGGNKQAAAELLGIARS
TLYRKIRTLGIDGRCLSG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcagcggggtggagcgcgtcggagtcgagatcccgggtggccccggcatcgatcgc
ccggttcgcctcctgcggtcggccgagcccgtgatcgagaggctcgggcggcggctcgaa
gggcagccactggtgatcatcctggccgacgcggaagcgcgggtcgtcgccctcagggcc
tgccgggcggaggtgcgcgactggtgcgactgcctgcacatcgtccccggctgcaggctg
gccgaggagaccatcgggaccaacgcgatcgggtgcgccgtggaggagcggcgcccgttc
gtggtggtcggtcccgagcactaccgggtcaacctccaggggttcagcgcacgggcggtg
ccggtcaggcatccggtgaccggcgtactcaagggggtgctcgccctggcctgccggacc
gaggacgacagcgtcctgatgctgcccctcgtcgaggacgccgcggcgcggatcgagacc
gacctcggcgacgacgccacccggctggagcggcggttgctggaccgcttcctgcagatc
acgcgccgctccacagcagcggtggtctgcctgaaccgtgacctgctcatcagcagcacc
cttgccgggccgctggtgagcccggtggaccagccgttcctctgggactgggcgtcgcgc
aagctcgccgaccgtgacgagtactgcggcgagctgcggctgtccggcagcgtcgtcgtg
caggcccggtgcaccaccgtccgggaggacgaccaagaggccggcattctcatcgagatg
cggccgggtccggccaccctgaccgccgtcggcgcgcggcgccccgtcacgagcggcacg
accggcgagggcccggtgcccgggcgcagtgccgcggccgagcgcgtccgccgcgaactc
acggccgtggcacggtcccagggaccgatcctgatcaccggggagccgggcacgggcaag
gcctttctggcccgccacctccacgaccgcacgggcctgcccggcaccgtgactgtgctc
gagacggggcaatgcatcgacgacccgcttgcgtggttcgagcggctgcgggcggctctc
gccatcccgggcacactggtgctgcggcagatcgacgagttgcccgtcgagttcgctccg
cgcgcggtcggcctggtcgaacgagccgacgggcacccgatccaggtcattgcgaccgcc
cggctgaccaacggcgaggacgccatgacgcggctgcgcgactgcttcccggcgcggctg
cagctgcccccgctgcgcaagcgggccgaggacgtcgccgacatcgcgagggtgctcgtt
cgcgatctcacccgacgctcgcctgtgccccggctggagccggccacggtccagaacctg
atgggccaggtttggccgggcaacatccgcgagcttcgcgcggtgctgagcagcgcgctg
ctccggtcggtccgccgcgacatcgcgatcgagcacctcccgccggagtaccgctcggcg
ccgatcaggcaccggctgacctcactccagcgggtcgagcgagaggcgctgctcaacgcg
ctcgaggacagcggcggcaacaagcaggctgcggccgaactgctcggcatcgcccgctcc
acgctgtaccgcaagatcaggaccctggggatcgacgggcgatgcctgagcggttga
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