Pseudonocardia broussonetiae: HOP40_34105
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Entry
HOP40_34105 CDS
T07210
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro02020
Two-component system
pbro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HOP40_34105
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HOP40_34105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbro03021
]
HOP40_34105
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pbro02035
]
HOP40_34105
Transcription machinery [BR:
pbro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HOP40_34105
Bacterial motility proteins [BR:
pbro02035
]
Flagellar system
Flagellar assembly proteins
Stator
HOP40_34105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
KORA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QJY50174
UniProt:
A0A6M6JQ43
LinkDB
All DBs
Position
complement(7055936..7056835)
Genome browser
AA seq
299 aa
AA seq
DB search
MSRHTPGHSAVLDGSVQLKAFAGAIVTALNRREQGPLEPAPAPVAPVGPVPVADRTPVEQ
LWDAYLTEPTRPVRDRLLVHYTPLVRAVAHRTAAGLPTYVDIGDLVQSGVFGLIDAVERF
DPQRCPRFESYAAQRIRGAILDELRAQDWVPRTIRGRARELERAQERLESRLRRAASDHE
LAAELGVAPRDLRSVGKHVALVSIDALDDGAGGLSELLADDDAPDPMAVIQARETSRQLS
IAVAQLGERDRLVVQMYYLENRTLAEIGRHLGVTESRVCQLHTRLVGRLRGRLEELAAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcacaccccagggcatagcgcggtcctggacggatcggtgcagctcaaggcg
ttcgccggggccatcgtcaccgcactgaaccgtcgcgagcagggcccgctcgagccggca
ccggctcccgtggcgccggtcgggcccgttccggtcgccgaccggacgcccgtcgagcag
ctctgggacgcctacctgaccgagccgacacgcccggtgcgtgatcgactgctcgtccac
tacacgccgctcgtccgcgcggtcgcgcaccgcacggcggccgggctgccgacctacgtc
gacatcggcgacctggtccagtccggggtcttcggcctgatcgacgccgtcgagcgcttc
gacccgcagcgctgcccccgcttcgagagctacgcggcccagcgcatccgcggcgccatc
ctcgacgagctgcgcgcccaggactgggtgccgcgcacgatccgcgggcgggcccgggag
ctggaacgcgcgcaggagcggctggagtcgcggctgcggcgcgcggcgtccgaccacgag
ctcgccgccgagctgggtgtcgcgccgcgcgacctgcgcagcgtcggcaagcacgtggcg
ctggtgagcatcgacgccctcgacgacggcgcgggcgggctgtcggagctcctcgccgac
gacgacgcgccggacccgatggccgtcatccaggcgcgcgagacctcgcggcagctgtcg
atcgcggtggcgcagctcggggagcgcgaccggctggtcgtgcagatgtactacctggag
aaccggacgctggccgagatcgggcggcacctgggcgtcaccgagtcgcgggtgtgccag
ctgcacacgcggctggtcggacggctgcggggccggctcgaggagctcgccgcgggctga
DBGET
integrated database retrieval system
