KEGG   Plasmodium brasilianum: 92369002
Entry
92369002          CDS       T10352                                 
Symbol
MKS88_000912
Name
(RefSeq) replication protein A1
  KO
K07466  replication factor A1
Organism
pbrs  Plasmodium brasilianum
Pathway
pbrs03030  DNA replication
pbrs03420  Nucleotide excision repair
pbrs03430  Mismatch repair
pbrs03440  Homologous recombination
pbrs03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pbrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    92369002 (MKS88_000912)
   03420 Nucleotide excision repair
    92369002 (MKS88_000912)
   03430 Mismatch repair
    92369002 (MKS88_000912)
   03440 Homologous recombination
    92369002 (MKS88_000912)
   03460 Fanconi anemia pathway
    92369002 (MKS88_000912)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pbrs03000]
    92369002 (MKS88_000912)
   03032 DNA replication proteins [BR:pbrs03032]
    92369002 (MKS88_000912)
   03400 DNA repair and recombination proteins [BR:pbrs03400]
    92369002 (MKS88_000912)
Transcription factors [BR:pbrs03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    92369002 (MKS88_000912)
DNA replication proteins [BR:pbrs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    92369002 (MKS88_000912)
DNA repair and recombination proteins [BR:pbrs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     92369002 (MKS88_000912)
   MMR (mismatch excision repair)
     92369002 (MKS88_000912)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     92369002 (MKS88_000912)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon DUF8448 OB_MEIOB_N Peptidase_S41_N
Other DBs
NCBI-GeneID: 92369002
NCBI-ProteinID: XP_067075280
LinkDB
Position
3:complement(<547121..>550939)
AA seq 1272 aa
MNRNEEILSKATPNFIYKFFTEPNSEEALSWLNTEIKLICFSQMNAGASQVFLKVIDGTI
PPEYYAIVHLGIEDNNNFSSTISFVKKIIKIENFSITNYYGKLFILAKKVSIFLNIENFD
IEDLFRKYHLQSISYYLLNSQQDNSPRENSTRGDNEYNYDNKYRGGNSNISSNNNNSNNS
NNSNNSNNINNINNINNHSSSSINSSNNNNNHRVTNEFYCENKPRDSEYTRATIDYNNNR
LNIKNFYESNEYYENNMRGNKEKYHHVPNENFVKEPSGPNDNSGYRDNLANRENITHREN
LSYGENQIHGLNPSYRESLKSPNNSRVGDSNINNRNYEEGHMVDLQNRGKFSYNNERTNC
ASYNNYTNYTNCTNYPSNVRDYKSNNEGRSSPQPKHSEYRENGGYNKRNNTINYDRNKYL
SENESYNSNSKSNNNSNSNIINSKSKTHIISRDVVMSSGRNNNYDENIHRNGGAYRGEYN
FEVGVSNSINKNYSDNNSDPRNDNINDYNNDNNNDNNNNDYAKNGIKGLNSSPHEGKLLE
GEKESYIMSNMYGIRRHTDERSHNCRSYNGSNLNNRNYLDDGNYNISSGSIHGIDIPSGG
ARNILSGIDHTRDREQEKIKNVGSYRQGKEDIYYNRKKNDHGENSIHADEEGKMYIGRNA
ESYNSSAKLSKNEEGINEGYCRRSAEYDSSGNNISNNYGNSYGNNNGNNNGNNNYGNNKI
SSKEENLFSSYNQTDEGRKHMRSESVGSLQETKETLNNDIDELSSDRRNEIKMLKENTLS
RKIRKNNPYQSNPSQSNTYQSNNAVIKTNDGILMQINKLSQYSSKWIIKARVQSKDNIRK
FYSGNKEGKVFNIELCDEDGEIKGNFFGKAVDKWYDFLQVGKIYKISKGNIKAANKKFNT
LKHDCEITLDENSIIELLEENDFNIPKFIYNFTYIDNIKNMNTGSLVDVIGIVFNFQETM
QILIKKTGQYKEKRDLILIDDSNDTINVTLWGDHALKIEEMDLKDNCIVCFKYLKVGEWK
GKKLESHIKTKIEINPEIDRAYILKNWWINNKKNMHALVNLNSNNFNIELQKTIEEIKKD
VNVANEDALSGKGIIFTTFGFIDHIYNTIPVYSACPDCNKKMITNNIADEEIETSQLLDE
SMYCAKCNKNNIPIYNYSINLKITDSTDSLRASAFSNCAKTIMNGLSADEFMKLRQEYVT
QENIENFDLIEKVKLKEFFFRIKAYMTSHMDELKKNYTIIEIIPLSKLLLDNCRYLVKSI
RTLTEKRELENE
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgaatagaaacgaagagattttaagtaaggctacgcctaactttatatataaatttttt
accgaaccaaattcagaagaagcgttaagttggttgaacactgaaataaagttgatttgt
tttagtcaaatgaatgcaggggcgagtcaagtttttttaaaagttattgatggaacaata
ccacctgagtattatgctattgtacatttaggcatagaggacaataacaactttagttct
actatatcgttcgtaaaaaaaataattaaaattgaaaatttttctattacgaattattat
ggaaaacttttcattctagcgaaaaaggttagtatctttttaaatatagaaaattttgat
attgaagatttatttagaaaatatcacttacaaagtatatcttattatctgttaaattca
caacaggataatagtccaagggaaaattccactcgtggggataacgaatataattatgac
aacaaatacagaggtggtaatagtaatattagtagtaataataataatagtaataacagt
aataacagtaataacagtaataacattaataacattaataacattaataaccatagtagt
agtagtattaatagcagtaataataataataaccatagagttactaacgaattttattgt
gaaaataaacccagagatagtgaatatacacgcgctacgatcgattacaataataataga
cttaatattaaaaatttttatgaatcaaatgaatattatgaaaataatatgcggggtaac
aaggaaaagtaccatcatgtacccaacgaaaattttgtgaaagaaccgagtggtccgaat
gataattcgggttatagggacaatttagcaaatagagaaaatatcacccatagggaaaat
ttatcgtatggggaaaatcaaatccatggtttgaatcccagttatcgtgaaagtttgaaa
agcccaaataacagcagagttggggatagcaatataaataatagaaattatgaagaaggt
catatggtggatttacagaatagaggaaagttttcatataataatgaaagaactaattgt
gcaagttataacaattacacgaattacacaaattgcactaattacccatccaatgtaagg
gattataagagtaataatgaggggagaagctcacctcaaccaaagcacagtgaatataga
gagaatggaggttataacaaaaggaataacacaattaattatgacagaaacaaatattta
tccgagaatgaatcttacaatagtaacagtaaaagtaataataatagcaacagtaatatt
attaacagtaagagcaaaacacacattataagcagagacgttgttatgagcagtgggagg
aacaacaactacgacgaaaatattcataggaacggtggtgcatacagaggggaatataat
ttcgaggttggagtaagtaacagtattaataaaaattatagtgataataacagtgatcct
cgtaatgataatattaatgattataataatgataataataatgataataataataatgac
tatgcaaaaaatggaatcaagggtttaaattcttccccacacgagggaaaattgcttgaa
ggagagaaggaatcatatattatgagcaacatgtatgggattagaagacacaccgatgaa
agaagtcataactgcagaagctacaacggaagtaacctcaacaacagaaactatcttgat
gatggaaactataacattagtagtggaagtattcacggtattgatatcccgagcggtggt
gcaagaaacatcctaagtggtattgatcatacccgagatagggagcaggaaaagatcaaa
aatgtgggtagctatagacaaggaaaagaagacatctactataataggaagaaaaatgat
catggtgaaaatagcattcatgctgatgaagaagggaaaatgtatatagggaggaacgct
gaaagttacaacagtagtgcgaaactaagtaaaaatgaggaaggtataaatgaagggtat
tgtcgtcgctctgcggaatacgatagtagtggtaacaatattagtaataattatggtaac
agttatggcaataataatggcaataataatggcaataataattatggtaataataaaatt
agtagtaaagaagagaatctgttttccagctacaatcaaacagatgagggaaggaaacac
atgagaagcgaaagcgttgggagcttgcaagaaacaaaggaaacgctaaacaatgatata
gatgagttatcatcagacagaagaaatgaaataaaaatgttaaaagagaatacattaagt
aggaaaattaggaaaaacaatccttatcagagtaacccttctcagagtaacacatatcag
agtaataatgccgtgataaaaacaaatgatggaatattaatgcaaataaataagctatct
caatactcttcaaaatggattatcaaagctagggttcagtccaaagataatattagaaaa
ttttactcaggtaataaagaaggaaaagtatttaatatagaattatgtgatgaagatggt
gagataaaagggaatttttttggtaaggcagttgataaatggtatgattttttacaagta
ggaaaaatatataaaataagtaaaggaaatataaaagcagcaaataagaaatttaatact
ttaaaacatgattgtgaaattaccttagatgaaaattctattatagaattattagaagaa
aatgattttaatattccaaaatttatttataattttacttatatagataatattaaaaat
atgaatacaggttctttagtagatgtaattggaattgtattcaattttcaagagactatg
caaattttgattaaaaaaacaggacagtataaagaaaaaagggatttaatattaatagat
gatagtaatgatactattaatgtaaccttatggggtgaccatgctctaaaaatagaagaa
atggatttaaaggataactgtattgtctgttttaagtatttaaaagttggggaatggaaa
ggcaaaaaattagaatctcatatcaaaacaaaaattgaaataaatccagaaattgataga
gcttatattttaaaaaattggtggatcaataataaaaaaaatatgcatgctttagttaat
ttaaatagtaataatttcaatatagaattacaaaaaactattgaagaaattaaaaaagat
gtcaacgtagcaaatgaagatgctctatcaggaaaaggaattatttttacaacttttgga
tttatagatcatatatataatactatacctgtatattccgcttgtcctgattgtaataag
aaaatgattactaataatatagccgatgaagagatagaaacatctcaacttttggatgaa
tcaatgtattgtgccaagtgtaataaaaataatattcctatttataattattctattaat
ttaaaaattactgatagcactgattcgttaagagcttctgccttttccaattgtgcaaaa
acaattatgaacggcctatccgctgatgagtttatgaaactaagacaagaatatgttaca
caagaaaatattgaaaattttgatttaattgaaaaagtcaaactaaaagaattctttttt
cgaattaaagcctatatgacatctcacatggatgagctaaaaaagaactacactataatt
gaaataattcccctcagcaaattgctgcttgacaactgcaggtatttggttaagtccatt
aggacccttacagagaagagggaattagaaaacgagtga

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