KEGG   Plasmodium brasilianum: 92369167
Entry
92369167          CDS       T10352                                 
Symbol
MKS88_001078
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pbrs  Plasmodium brasilianum
Pathway
pbrs03030  DNA replication
pbrs03410  Base excision repair
pbrs03420  Nucleotide excision repair
pbrs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    92369167 (MKS88_001078)
   03410 Base excision repair
    92369167 (MKS88_001078)
   03420 Nucleotide excision repair
    92369167 (MKS88_001078)
   03430 Mismatch repair
    92369167 (MKS88_001078)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbrs03032]
    92369167 (MKS88_001078)
   03036 Chromosome and associated proteins [BR:pbrs03036]
    92369167 (MKS88_001078)
   03400 DNA repair and recombination proteins [BR:pbrs03400]
    92369167 (MKS88_001078)
DNA replication proteins [BR:pbrs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    92369167 (MKS88_001078)
  DNA Replication Termination Factors
   ELG1-RFC complex
    92369167 (MKS88_001078)
Chromosome and associated proteins [BR:pbrs03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    92369167 (MKS88_001078)
DNA repair and recombination proteins [BR:pbrs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     92369167 (MKS88_001078)
  Check point factors
   HRAD17(Rad24)-RFC complex
    92369167 (MKS88_001078)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 Rad17 AAA_30 AAA_22 AAA_19 RuvB_N SLFN-g3_helicase DEAD AAA_11 AAA_23 AAA_14 AAA_assoc_2 nSTAND_NTPase5 nSTAND3 AAA_16 KTI12 AAA_28 RNA_helicase ResIII FtsK_SpoIIIE PIF1 HP_1247_M AAA_5 AAA_7 bpMoxR Viral_helicase1 ABC_tran ATPase_2 AAA_18 Mg_chelatase AAA_2 TIP49_C TniB DNAX_ATPase_lid UPF0147 RsgA_GTPase SNF2-rel_dom AAA_33 DUF815 NPHP3_N nSTAND6 VapE-like_dom DUF2247
Other DBs
NCBI-GeneID: 92369167
NCBI-ProteinID: XP_067075010
LinkDB
Position
4:complement(<317157..>318149)
AA seq 330 aa
MDNLPWVEKYRPKKLDDIVHQTNAISMLKEVVRTKNMPHLIFHGPPGTGKTSAINALAHE
LFGKDNISERVLELNASDDRGINVVREKIKAYTRISISKNKINNETNETLPTWKLVVLDE
ADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRFQGIPVNIKKEKL
LYICKSENINITDDALNKIIETTQGDLRRAVSVLQLCSCINPQITLDSVLDVSGLPTDDI
ILKIIDACKVKDLKILEKTVQDVIEDGYDVAYIFKAFNNYFVMNTDYNDTIKYQILLELS
RHDYRLHSGATKYIQLMSFASSVHSLLNTA
NT seq 993 nt   +upstreamnt  +downstreamnt
atggacaatctgccatgggtggaaaagtacagacccaaaaagctagatgacatagttcac
caaacaaatgcaatatctatgctgaaagaagtagtaagaacaaaaaatatgcctcattta
attttccatggcccacctggaacaggcaaaacatcagcaataaatgcattagcacatgaa
ctatttggtaaggataatataagtgaacgtgtattagaattgaatgcatcagatgataga
ggtataaacgtagtaagagaaaaaataaaagcatatacaagaataagtataagtaaaaat
aaaataaataatgaaacgaatgaaactttaccaacatggaaactagtagttttagatgaa
gcagatatgatgacagaggatgcacagtcggctttaagaagaattatagaaatatattcc
aatgttacaagatttatacttatatgtaattatatacataaaatctcagatcctatatat
agtagatgttcgtgttatagatttcaaggaatacctgtaaatataaaaaaggaaaaattg
ctttatatatgtaaaagtgaaaatataaatattacagatgatgcattaaataaaattatt
gaaaccacacaaggtgacttaagaagagctgtatctgttttacagttatgttcatgtatt
aatcctcagataacattagattccgttttagatgtttcaggtttaccaacagatgatatc
atcttaaaaattatagatgcatgtaaagtgaaagatttaaaaattcttgaaaaaactgta
caagatgtaattgaagatggttatgatgttgcttatatttttaaagcatttaataattat
tttgttatgaatacagattataatgatactattaaatatcaaattctgttggaattatca
aggcatgattatcgtcttcatagcggggctaccaagtatattcagcttatgagtttcgct
tcatcagtacattccctattgaatacggcctaa

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