KEGG   Plasmodium brasilianum: 92369442
Entry
92369442          CDS       T10352                                 
Symbol
MKS88_001354
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
pbrs  Plasmodium brasilianum
Pathway
pbrs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbrs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92369442 (MKS88_001354)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbrs03041]
    92369442 (MKS88_001354)
Spliceosome [BR:pbrs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    92369442 (MKS88_001354)
 Complex C
   U5 SnRNP specific factors
    92369442 (MKS88_001354)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 WDR90_beta-prop_4th WD40_like Beta-prop_Nup120_160 CLN3 DUF6465
Other DBs
NCBI-GeneID: 92369442
NCBI-ProteinID: XP_067074725
LinkDB
Position
5:complement(423925..427589)
AA seq 455 aa
MKAKKKKEAKKKKEVKEKKEAKKKKEVKEKKGAKKRKEVKEKKEVKKKKEVKEKTEVKEK
CKKLKAFLWFYVINLIVVVRRSKRNIQPLDIKLWDKKGKRRDTNLYKNGEANRSGIKRKQ
LQTDVHIDRECKMAIVKPSAQVLEEVENEVEKRKTGLFFPNMLINSHKGEVYSVNFSSDG
KYITSSSFDMTIMIHNVYNECETINVLRGHKNAVLQAKWSKDDSYICSVSADHNACIWDV
ENETRIKNFKGHTSIVNALDIINYNLFVTCSDDCTLKFWDIRCKKLVHTIKEDFPLLAVC
SDKKGEFIYVSSVDNTIKIYDCKNYKLKNTLTGHKNYISGLDINNDETILASISADETIC
FWDIQPFPCDEQLLFRLNSPKFNIDYNLIKLSFNNDNLLACGSGDNYLYIYDYKQKVLKF
TLPGHNSTINDVAFHPLEEIVASCSSDNTIFLGEL
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaaagctaaaaaaaagaaagaagctaaaaaaaagaaagaagtcaaagaaaagaaagaa
gctaaaaaaaagaaagaagtcaaagaaaagaaaggagctaaaaaaaggaaagaagtcaaa
gaaaaaaaagaagttaaaaaaaagaaagaagtcaaagaaaagacagaagttaaagagaag
tgcaaaaaattaaaggcatttctatggttttatgtaatcaacttgattgtagttgtacgg
cgttcaaaaaggaatattcagccgttagacataaaactatgggataagaaggggaaaaga
agagatacaaatttatataaaaacggagaagcaaacagaagtggcatcaaacgcaagcag
ctacaaaccgacgtgcatattgacagggagtgcaaaatggccatcgtaaaacccagtgca
caggttttagaagaagtagaaaatgaagtggaaaagagaaaaacaggtttgttttttcca
aatatgctaataaatagtcataagggggaagtgtactcagttaatttttcgtccgatgga
aagtatataacatcatcaagttttgatatgaccataatgattcataatgtgtataatgaa
tgtgaaactattaatgttttaaggggtcataaaaatgcagtattacaagcgaaatggagt
aaagatgatagttatatttgtagtgtatctgctgatcataatgcttgtatatgggatgtt
gaaaatgaaacaagaataaaaaattttaaaggtcatacaagtatagttaatgcactggat
ataattaattataatttatttgttacttgtagtgatgattgtacattaaaattttgggat
ataagatgtaaaaaattagtccatactattaaagaagattttcctttattggctgtttgt
tcagataaaaaaggagaatttatttatgtaagttcagttgataatacaattaaaatttat
gactgtaaaaattataaattaaaaaataccttaacaggtcataaaaattatataagtgga
ttagacataaataatgatgaaactatattagcttcaattagtgcagatgaaacgatttgt
ttttgggatatacagcctttcccttgtgatgaacaattactttttcgattaaattctcca
aaatttaatatcgactataatttaattaaattatcttttaataatgataatttattggct
tgtggaagtggagataattatttatatatttatgattataagcagaaggttttaaaattt
accttgccaggtcataacagtactataaacgatgtcgcctttcacccattagaagaaatc
gttgcttcgtgttcgtcggataataccatttttctgggcgagttgtag

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