Plasmodium brasilianum: 92369722
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Entry
92369722 CDS
T10352
Symbol
MKS88_001634
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92369722 (MKS88_001634)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrs03041
]
92369722 (MKS88_001634)
Enzymes [BR:
pbrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92369722 (MKS88_001634)
Spliceosome [BR:
pbrs03041
]
Complex A
U2 snRNP components
U2 related factors
92369722 (MKS88_001634)
Complex B
92369722 (MKS88_001634)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
Cas3-like_C_2
SRF-TF
Motif
Other DBs
NCBI-GeneID:
92369722
NCBI-ProteinID:
XP_067074522
LinkDB
All DBs
Position
6:complement(165000..169354)
Genome browser
AA seq
1422 aa
AA seq
DB search
MLSFKSPINMGKHSDEYYYKAKEKDNSSRKKKRRERSYDKSEREKEIDDEDMRKYKNYQE
EKSYRKRDSEYYKEKIIKERKNSLKENHKKMKVKEYNHCSDEEYKNVYANDNKHNKSYDL
SSISSKHVESPTKKKFQGDKYEYQKNERGKRRNMEEMDEKRYAHKCEGKEKEEVEEEEKN
NNKVKHNKKGAHCSDNYSSGSSSAEREKYYKRGKIGKGVREEEEEEEERGTERGEEERAE
KDLDKEGKKKKKHHYSYARSDSHSTVRGKHDGKREYEKKRKKKKRDSYDGVSSKNDEEEE
EQEEQDYQKEKKKKEGKERSREQMSGGKNRVKEHAKGEEENAEEDEEKKEDPNKLSRLER
LKLFAEKIKKSGNEKTGKGTKFSLTTTSSSAHKKVHLEVFMLNRKEEDGTNINRNISLDE
TILNDENRYRGGEEDGGLIMGIKKNGEKGLGEKDEEEVEQGEDPLELFMKNLEIENMEEG
DDKEEDGKIRANQCITLDEIYSYHMNRHKFEKVQSEGEDDNANNSNEADRTEEKEICDKE
MNKSRIQMNNASSEENQMKNASDEEDEKFHKLFIEALKKKAEDDVKKENEKEVKVTAENG
VAGKEDDKRSAKKKQELEIGVISDTEENSNEDLSDDSEFNCETNSLKKVNKKVLQVNHDE
IEYLPIKKNIYVQVSEITNMKENDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILP
ILEKKNFKKMFNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRKNDG
PIGIILTPTRELSIQVKNEAKVYCDSVSLKILAVYGGSNIGKQLNTLKRGVEILVGTPGR
IIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPN
YIQTLAKKLLYKPIEIIVGEKGKTNNNIYQFVEVLDESKKIFRLLKLLGEWVKYGLILIF
VNKQLEADVLYLELFKYDYKTLVLHGGQDQADRQCTLQNFKNEQNKILIATSVMARGIDI
KNIILVINYECPDHIEDYIHRIGRTGRSNNIGYAYTFITPNEHSKAYDIYNLIKNNIYYL
NKTIDIPPELETMVQQYANNKALAKKELGLVVEENADNVDVYTSDGDVENTSSRENVNMP
SNAVVPPSPNTPLSRSIPINNNTHPNHNTQSNHNAPLNADPNEMKKIELEIQRIKMNDTM
NLSLKAKKINELMKTYNFIAHHQNNYRSVNISQENDIDKAAEQEALKATEHIKDEKERQA
TFNKTKEDIKKKLINNKMQMESRNESIQRNMLLNVIRTKNMKKYSPYLPHTYITEDNTIL
EEFYINDYPQHVRLKISHRDVLARIADMSGASCQIKGQYANPSKPNKTNFLLDTKPLHIE
ITASTYNQVQIARNELTSLLNDFMQKCNIKNQKTSAVYSAFR
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgtttaagagtccgataaatatggggaagcattccgatgagtattactataaa
gcaaaagagaaggacaatagtagcagaaaaaaaaaaagaagagaaagaagctatgacaaa
agtgagagagaaaaagaaatagatgatgaagatatgagaaagtataaaaattatcaagag
gagaaaagttataggaagagggacagtgaatattacaaagagaaaataattaaagagaga
aaaaatagcttaaaagaaaatcataaaaaaatgaaagtgaaagaatataaccattgtagt
gatgaggaatacaagaacgtttatgcaaatgataacaagcataacaagtcatatgattta
tcatcaattagttcaaaacatgtagaatccccaacaaaaaaaaaatttcagggggataag
tatgagtaccaaaaaaatgaaagagggaaaagacgtaacatggaagagatggatgaaaag
aggtatgcacataagtgcgaagggaaagaaaaagaggaggtagaggaagaagaaaaaaat
aataataaagtaaaacacaacaaaaaaggggctcattgtagtgacaactactccagtggt
agtagctcagcagaacgggaaaaatactacaaaagggggaaaattggaaaaggagtaaga
gaagaagaagaagaagaagaagaaaggggaacagaaagaggagaagaagaaagagcagaa
aaggacttggataaggaaggaaaaaaaaagaaaaaacatcactacagctatgcacggagt
gattcccatagcacagtaaggggaaaacacgatggcaaaagagagtatgaaaaaaaaagg
aaaaaaaaaaaaagagatagttacgacggggtaagcagtaagaatgatgaggaggaagag
gaacaagaggagcaagattaccaaaaggaaaaaaaaaaaaaagaaggaaaagaaaggagc
agagaacagatgagtgggggtaaaaaccgcgtaaaggagcacgcaaaaggtgaagaagaa
aatgcggaagaggatgaagaaaaaaaggaggatcctaataaacttagcagactagaaaga
ctaaagctgtttgcggaaaaaataaaaaaatcagggaatgagaaaacagggaaaggcaca
aaattttcgttaaccactacaagtagtagtgcacacaaaaaggtacatttagaggttttt
atgttaaataggaaagaggaagacgggacgaatattaatagaaatatatccttggacgag
accattttgaatgatgaaaatcgttatagaggaggtgaggaggacggtggtcttattatg
ggtataaaaaaaaatggggaaaagggactaggagaaaaagatgaagaagaagtggaacag
ggagaagacccattagaactgtttatgaaaaatttagaaatagaaaatatggaagagggg
gatgataaggaggaggacggaaaaataagagctaatcagtgcataacgttagacgaaatt
tatagctaccatatgaacagacacaaatttgaaaaagtgcaaagtgagggggaggatgac
aatgcgaataattctaatgaagctgataggactgaggagaaagaaatatgtgataaggaa
atgaacaaaagtaggattcaaatgaacaatgcttctagtgaagaaaatcaaatgaaaaat
gcatcggatgaggaagatgaaaaatttcacaaactgttcatcgaggcacttaagaaaaaa
gcggaggacgatgtgaagaaagaaaatgagaaggaagtaaaagttacagcagaaaatggt
gtagcaggaaaagaggatgacaaaaggagcgcaaaaaagaagcaggagctggagattgga
gtaataagcgatacagaggaaaactcaaatgaagacttaagtgacgacagcgagttcaac
tgtgaaacgaatagtttgaaaaaggttaacaagaaagtgttacaggtcaatcatgacgaa
attgagtatttaccaataaaaaaaaatatttatgtacaagtaagtgaaataacaaatatg
aaagaaaatgatgttgacatgtttagaaaaaataatggaaatataattgtgaggggtaaa
aattgtcctcgtccagtgcaatacttttatcaatgtggattaccttcaaaaattttaccc
attttagaaaaaaaaaattttaaaaaaatgttcaacatacaaatgcaaactatacctgca
cttatgtgtggtagagatgttatagctatagctgagacaggtagtggaaaaaccttgtcc
tatttatttcctctaattcgacatgttttacatcaaccacctttgagaaaaaatgatgga
cctataggtattatcctcacacctacaagagagttaagtatacaagtaaaaaatgaagca
aaagtatattgcgattctgttagtttaaaaatattagcagtatatggaggttccaatata
ggaaagcaattgaatactttaaaaagaggagtagaaatattagtaggtactccaggtcgt
attatagatatactaactattagtaattgtaaagtaactaatttgaatagagtatcattt
gttgtattagatgaagcagaccgtttgttagacttaggatttgaatctcagattcatagt
atattaaataattgtagaaaggataaacagacagctatgatttctgctacgtttccgaat
tatatacaaaccttagcaaaaaaattattatataaacctatagaaataatagttggagaa
aagggaaaaacgaataataatatttatcagtttgttgaagtactggatgaatctaaaaaa
atttttcgacttttaaaattactaggtgaatgggtaaaatatgggttaattcttattttt
gttaataaacagttagaagcagatgtgttatatttagaattattcaaatatgattataaa
acgttagtattacatggagggcaggatcaagcagatcgacaatgtactttacagaatttt
aaaaatgaacaaaacaaaattttaattgctacttctgttatggcgagaggaatagatata
aaaaatattatactagtaattaattatgaatgtccagatcatatagaagattatattcat
aggattggtagaacaggacgatctaataatataggatatgcttacacgtttattacacct
aatgaacattcaaaagcgtatgacatttataatttaattaaaaataatatttattactta
aataaaacaatagatataccacctgaacttgaaaccatggttcaacaatatgcaaataac
aaagctcttgccaaaaaggagctcggtttagtagtagaggaaaatgcggacaatgtagat
gtgtatacctccgacggggatgtagaaaacacttcgagtagggaaaatgtgaatatgcca
tctaacgctgtagtgccaccttcccctaacacgccacttagccgtagcataccaattaac
aataatacgcatcctaaccataacacgcagtctaaccataacgctccgcttaacgcggac
cctaatgagatgaaaaaaatcgaactagaaatacaacgaataaagatgaacgacacaatg
aacttatcattgaaagcaaaaaaaataaacgaactgatgaaaacatataattttattgca
catcatcaaaacaactacaggagtgttaatatatcccaggagaatgatattgacaaggct
gcagagcaagaagcattaaaagcaacagaacatataaaggatgaaaaagaaaggcaagct
acatttaacaaaaccaaggaggatattaaaaaaaaattaataaataacaaaatgcaaatg
gaatcgagaaatgaaagtattcaaagaaatatgcttttaaatgttatcagaacaaaaaat
atgaagaaatattccccttacttaccacatacatatattacagaggataacacaatttta
gaagaattttacattaatgattacccacaacatgttcgtttaaaaatttctcatcgcgat
gttttggcaagaattgctgatatgtcaggagctagctgtcaaattaaaggacaatatgct
aacccatccaaaccaaataaaaccaatttcttactagacactaaaccactacacatagaa
attactgcatcaacatacaatcaagtacaaatagctcgaaatgaactcacatctcttctt
aatgattttatgcaaaaatgtaacatcaaaaatcagaaaacaagtgctgtatatagtgcc
tttcgttag
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integrated database retrieval system
