Plasmodium brasilianum: 92370346
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Entry
92370346 CDS
T10352
Symbol
MKS88_002258
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03013
Nucleocytoplasmic transport
pbrs03015
mRNA surveillance pathway
Brite
Enzymes [BR:
pbrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
92370346 (MKS88_002258)
5.6.2.5 RNA 5'-3' helicase
92370346 (MKS88_002258)
Messenger RNA biogenesis [BR:
pbrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
92370346 (MKS88_002258)
mRNA cycle factors
Common to processing body (P body) and stress granule
92370346 (MKS88_002258)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
92370346
NCBI-ProteinID:
XP_067073697
LinkDB
All DBs
Position
8:complement(351154..356580)
Genome browser
AA seq
1808 aa
AA seq
DB search
MDKTFDYNQIDVDDVDDFDDFYDFYPHNEKKKINRISKSYFSDDYYDYDMKDADENSTIH
KEGVGRSKREMKNKDQHSQNKDNTNIKSVNCSYTGSVEKKQEKNEDDKVCVRIDDRREIR
HKGDEKKEEGEEEVEVDEVEVDEIEVDEIEVDEIEVDEIEVDEIEVDEIEVDETEVEEVE
EEGKGKTVGMDVRQNVRKNDQRRNAKVIDELGGNEQDGISKKKKKNHNNQKHEHTNSFHV
QNSIEHLYDVSNYDDNLSSGCLEYPREDYDLENKKKKRYEERDNVWSSDSNSNGNISNNE
YIRNGSNRNGNSNNNSSTNSYSRIGSNYAERRNTNERSKHSNNNSVSNRSRLKKKEEKLK
YYRCRYCEIDSIDSVVQCNTCDRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKNSLLGET
ILECYNCGCRNVFLLGFLPTSEEGVVVIICRDPCLARFLSLYGRSNARGNEDDHAKEHAK
EYAKEYAKEYAKEYAKEYAKEYAKEHAKEYAKEHVKEYVNDSESTIKKGDIGKKQELHNN
EKGVKYKKEQQDTDDHDDNVRRAKNDVDITTGKNYIISSDEFSFSEDNWSELEGKNSMNY
DSYFCYDKRKKRERKNKIGKTDEKNVTSDEVKHERRKRDKVEGEGQRNAERGVQKSGHAN
KHDVWEPDQNGSISEGSHDSDNGSINGSISGSINGSANGSINGSASGSINGSDNGSGGMG
ELAELGKMKEWNLKKWQPLIEDRCFLDWLVSIPSVEEAEKKGKKLATSYNVNKLEELWKN
KKDVYIDELDSEILNDEPVKVALKYDDVHHYQSIFAPLIKLEADYDKSIKEGQKQGNVTI
RWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPNGKVWSCEGHISRLHNTEEIAL
ELRILGTADGPWVDNITTGFSVEFVWKSTAYDRMLLALNEFAYNSYSLSGYLYHKLLGHD
ISDESLEYYKNDLVYNNSNSNYHNSNSNYHNSNSNYHNSNNHNSNNHNSNSNYNMHDGKR
RGGLPIVNYSAPNLAPLNHSQIDAIKKSLVSPLSLIQGPPGTGKTLTCATLVYHLSTMRK
GGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCAKSRESVPSIADYLYLHNQMKLLKSDIG
EELNKLLELKEEVGELSQKDERRLKKLIFYAEQEILIEADVICSTCVGAMDKRLKKFRFS
QVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML
GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNPKCPMFFYNT
AGLEEMSASGTSYLNRSEASNMEKLVRTLLQCGLKANQIGVITPYEGQRAYITSLLQKNL
PFQHASDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIIC
GNAKVLSRQHYITKEKINSNETITNVNSVWINLLTQFKKKDLIVEGCLSNLKLVTINIPT
PVKQPSRYINFNYFEGYERADKGRALGSTSFRRITSAGYVDNIYGNSRITNYNYTSGNYD
RNNDKFNYNSGKNRKKFNSNISSTSTNHNNNISYINMNMSNHSYCNDSVMNKDFFSFMNH
HPGSKHGLNSYINNMSQLSQLNDYSVDNRNLLLSEGGKLHDASFSSNEKYNSSVKNCRSN
CGSICDSSIGNNPSNSNFLYYNNNLTEDKNMSNNSVDLNCKEGYYNLNSKNCDIFPQLFY
YKNNQSDNFHPSYQYANETNENRSLTLAPKKFKNKNVMSSSEHPNMLLQDGSVLVGDFKL
SGDPTQDV
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggataagacatttgattacaaccaaatagatgttgatgatgtggacgactttgatgat
ttttatgatttttaccctcataatgaaaaaaaaaaaataaatagaataagtaaaagctat
ttttctgatgactattatgattatgatatgaaagatgccgatgagaacagtacaatacat
aaggaaggggtcggaagaagtaaaagggaaatgaagaataaggatcaacatagtcagaat
aaggacaatacgaatattaaatcagtgaattgttcatatacgggttctgtggaaaaaaag
caagagaagaatgaagatgataaggtgtgtgtgagaatagacgaccgaagagaaattaga
cacaagggggatgaaaagaaggaggaaggagaggaggaggtagaagtagatgaagtagaa
gtagatgaaatagaagtagatgaaatagaagtagatgaaatagaagtagatgaaatagaa
gtagatgaaatagaagtagatgaaatagaagtagatgaaacagaagtagaagaagtggaa
gaagagggaaaagggaaaaccgtagggatggatgtaaggcagaatgtaaggaaaaatgat
cagcgccgtaatgcaaaagtaatagatgaacttggtggtaatgagcaagacggaatttct
aaaaagaagaaaaagaatcataataatcaaaaacatgagcatacgaattcatttcacgtg
caaaatagtatagaacacttatatgatgttagcaattatgatgacaacttatccagcgga
tgcttggaataccccagggaggattatgatttggaaaataagaaaaagaagaggtacgag
gaaagggataatgtctggagtagtgacagtaatagcaatgggaatatcagcaataatgag
tacatccgtaatggtagtaacagaaacgggaatagcaataataatagcagcactaatagc
tacagtcgtatcggtagtaattatgcagaaagaagaaacacgaacgagcgcagcaagcat
agtaacaataacagtgttagtaatagatctaggcttaaaaaaaaagaagagaaattaaaa
tattatagatgccgttattgtgaaattgattctattgatagtgttgttcagtgcaataca
tgtgatcgatggttttgtaatgggtcctatggtacctgtggtagtcatattgttactcac
ttagttcgatcaaaacataaagaaattaaattacataagaatagtctactaggtgaaact
attttagaatgttataattgtggatgtagaaatgtgttcttgttaggatttctgccgaca
tcggaggaaggggttgtcgtaattatctgtagggacccctgtttggctagatttctttcg
ttgtatggtagaagtaatgcaaggggaaatgaggatgatcatgcaaaagagcatgcaaaa
gagtatgcaaaggagtatgcaaaggagtatgcaaaggagtatgcaaaggagtatgcaaag
gagtatgcaaaggagcatgcaaaagagtatgcaaaggagcacgtaaaggagtatgtaaat
gatagtgaatcaactataaagaaaggggatattgggaaaaaacaagaattacataacaat
gagaaaggtgttaaatataagaaagagcaacaagataccgatgaccatgacgataacgtg
agaagagcgaagaacgacgtagatataacaacagggaagaactacataattagtagcgat
gaattttcgtttagtgaagataactggagtgagttggaggggaaaaacagcatgaactat
gacagttatttctgttatgataaaaggaaaaagagagaaaggaagaataaaattggcaaa
actgatgagaagaatgttactagtgatgaagtcaaacacgaaaggagaaaaagggacaaa
gtggaaggggaaggacaaagaaatgcagaaaggggtgtgcaaaaaagcggacacgctaat
aagcatgatgtgtgggaacctgatcagaatggtagtatcagtgaaggtagccatgatagt
gacaatggtagtatcaatggtagtatcagtggtagtatcaatggtagtgccaatggtagt
atcaatggtagtgccagtggtagtatcaatggtagtgacaatggtagtggcggaatgggc
gaattagccgagttgggaaagatgaaggaatggaatttaaaaaaatggcaaccactaatt
gaagataggtgttttttagattggctagttagtattccatctgttgaggaggcagagaag
aaaggaaagaagttagctacttcatataatgtaaacaaattagaggaattatggaagaac
aaaaaggatgtttatatagatgaattagattcagaaatattaaatgatgaacctgtaaag
gtagcactaaaatatgatgatgtacatcactatcagtctatttttgcaccattaattaag
ttagaagctgattatgataaatcaattaaagaagggcaaaaacaagggaatgtaacaatt
cgttgggatatcggattaaataaaaaaagatatgctcattttatatatgtgaaggaagaa
agtgaactaagattagtagcaggagatgagttgaaattgtcttacacatatccaaatgga
aaagtatggtcatgtgaaggtcatatatcaagattacataatactgaagaaatagcattg
gagttacgaattttaggaacagctgatggtccatgggttgacaatataactactggattt
tctgttgaatttgtatggaaaagtacagcatatgatcgtatgttattagctttaaatgaa
tttgcttataattcgtattcacttagtggttatttatatcataaactgttaggtcatgat
atatctgatgaatctttggaatattataaaaacgatttagtatataataatagtaatagt
aattatcataatagtaatagtaattatcataatagtaatagtaattatcataatagtaat
aatcataatagtaataatcataatagcaatagtaattacaacatgcatgatggaaagaga
aggggaggattacctattgtaaattactcagcgccaaatttagctcctcttaatcattcc
caaatagatgcaataaaaaaaagtttggtgtcccctttgtcattaattcaaggtccacca
ggaacaggtaaaacattaacgtgtgctactttggtatatcatttatctactatgagaaag
ggtggaaaggtattagtgacagctccgagtaacgttgctgttgatcagttatcagtacga
attcatagaacaggtttaaaggttgttagattgtgtgctaaaagtagagaatccgttcca
agtattgctgactatttatatttacataatcaaatgaaacttttaaaaagtgatataggt
gaagaattaaataaattattagaattaaaagaagaagtaggtgagttatcgcaaaaagat
gaaagaagattaaaaaaattaattttttatgctgaacaggaaatcttaatagaagcagat
gtaatttgttctacatgcgttggtgcaatggataaaagattaaagaaatttcgatttagt
caagtattagtagatgaagctacacagtcaacagaaccagaatgtttagttcctttagta
acaggtgcaaaacaaatagtacttgttggtgatcattgtcagttgggtcctattattgtt
tgtaagaaagctgcaaatgcaggattaggaaaaagtttatttgaacgattggttatgtta
ggtattactccatttagattagaagtacaatatcgtatgcatccagctttaagtgaattt
ccttcttatgtcttttatgatggttgcttacaaaatggaataacattaaaagagagggaa
tatccattaaaaaatttcccatggcctaatcccaaatgtccaatgtttttttataataca
gcaggactagaagagatgtctgcatctggtactagttatctgaatagaagtgaagcatca
aatatggaaaaattagtacgtacattattacagtgtggtttgaaagcgaatcaaataggt
gttattacaccatatgaaggacaaagagcatatattacatctttgttacaaaaaaattta
ccattccaacatgcatcagatatagaagtagcttctgttgatgcttttcaaggaagagaa
aaagattttattcttttatcatgtgttcgttctaataaaaaattaggaatcggtttcttg
aatgatcctagaagattaaacgttgctttaacaagagcaaaatatggattaatcatttgt
ggtaatgcaaaagttttgtcaagacaacattatataactaaggagaaaattaattctaat
gaaactattacaaatgtaaattctgtatggattaatttattgacacaatttaagaaaaag
gatctaatagtagaaggatgcttatctaatttgaaactagtcactattaatattccaaca
cctgtgaaacagccatccagatatattaattttaattattttgaaggatatgaaagggct
gacaagggtagagcgttaggttctacttcatttagaagaataacaagtgccggttatgtg
gacaacatatacgggaatagcagaattactaattacaattataccagtggtaattatgat
agaaacaatgacaagttcaattataatagtggtaagaacaggaagaagtttaacagtaat
atcagtagcacttcgacaaaccataacaataatatatcttatattaatatgaatatgtcc
aatcacagctactgcaatgactctgttatgaacaaggacttctttagcttcatgaaccat
catcccggaagcaaacatggtttaaactcctacattaacaatatgagtcaattatcacag
cttaatgattattctgtcgataataggaatttgttactgtcagaaggtgggaagcttcac
gacgcatccttttcgtctaacgaaaaatataacagcagcgtgaaaaactgcagaagtaac
tgcggctctatctgcgacagtagtatcggtaacaatccttctaattccaattttttgtat
tacaacaataatttgacagaagacaagaatatgtcaaacaactcggtagatttaaattgc
aaagaaggttattacaacttaaattcaaaaaattgcgatatatttcctcaattattttat
tataaaaacaatcagagtgataatttccatccttcttaccaatatgccaatgagactaat
gaaaaccgtagtctgacattagcacccaaaaaatttaagaataaaaatgttatgtcgagt
tccgaacatccaaatatgttgctgcaggatggttccgtgcttgtaggagatttcaagtta
agcggcgatccaacgcaagatgtgtga
DBGET
integrated database retrieval system
