Plasmodium brasilianum: 92370595
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Entry
92370595 CDS
T10352
Symbol
MKS88_002507
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92370595 (MKS88_002507)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrs03041
]
92370595 (MKS88_002507)
03036 Chromosome and associated proteins [BR:
pbrs03036
]
92370595 (MKS88_002507)
Spliceosome [BR:
pbrs03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
92370595 (MKS88_002507)
Complex B
92370595 (MKS88_002507)
Complex C
U2 SnRNP specific factors
92370595 (MKS88_002507)
Chromosome and associated proteins [BR:
pbrs03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
92370595 (MKS88_002507)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_ECM29
Vac14_Fab1_bd
UME
IFRD
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
92370595
NCBI-ProteinID:
XP_067073941
LinkDB
All DBs
Position
8:1618602..1622849
Genome browser
AA seq
1415 aa
AA seq
DB search
MGSKRNELDRKDVYRNLNYSNEKLNGGDIKYVKEIDPILNDDYGDSFSNYRSNNKDVNIS
KLKNEIIQNELLNNDDINDVSLGLVKDKSIKKRENEFQKKKYDYILSPGRADPFSDKSPS
PEERTYVDVMQEIHNEGKRNKIIHGKKGSASGTTTNETRKKKLRWGYTEGEHTINKTNGD
GVDTSMYYTGIATIASGDAGSNDTGSVTTGTAATGTAATGTAATGPTSSDPVAARQKGEG
SGLRKESTKSKWDYVEEENSINFGSMPTPAPSKWVDTPFILNDGNIKKKKISRWDKIGEG
SAADNTGASDMKTPKIAILDANNINKNRNNISNNNNSSNNNNVLGSTPYIITNNNGTIIN
TPYMGNHTNMFTPMATGLSSSLQGDSLIKMKIKNEMDVRNRPLTDEDLNELLPSEGYEIV
KPPEEYETLRKNKLKAMFKSMAGTPLLLSNNSAAGRSGIISTNQMLSVNNVTVSSSGATD
TFPGKNAGLQNDSMSAIGGIVNNLVSTPYESKEKEMVQTPYMNNNMQSTLINTPFYDIPT
VNNNQQEEETHYSNIMQNKYFEINNPQVLSELKYIQLKDEDYIYFNKLFQNVNEEELSQD
ELKERKFMLLLLKIKNGTPSIRRTALRAITEKVKELGPETLFNLILPLMMQNTLEDQERH
LLVKVIDRILFKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMI
GIMRPDIDHPDEYVRNTTARAFAVVASALGIPSLILFLKAVCQSKKNWEARHTGIKIVQQ
IAILMGCAVLPHLKQLVNIIAHGLHDEQQKVRTITALALAALAEAAAPYGIEAFDSVLRP
LWKGITEYRGKLLAAFLKAIGLIIPLMDSYHANYYTREVMIILINEFNSPDEEMKKIVLK
CVKQCIQTEGIEKDYINQEVVDPFFEKFWVMRNSNDKRNFNLIVETTVEIANKIGGALVI
SRIVDDLKDPSEQYRKMVMQTIQSIINNLGVDDIDQKLEEQLIDGILYAFQEQASDDYYV
LLNSFDVIVNKLKLRMKPYLPQIAGIIRWRLNTPLPKIRQQSADLISRIAKLIKICGEQQ
MLGHLALYLYEYLGEEYPEVLGNIIRALKCIVVVLGVQNMTPPIKDLLPRITPILKNRHE
KVQENVIDLIGIIADKGGDLVSPKEWDRICFDLIELLKSNKKLIRRATIQTFGYIARTIG
PFEVLTVLLNNLRVQERQLRVCTTVAIAIVADTCLPYSVLAALMNEYRTQDLNVQNGVLK
ALSFMFEYIGEIAKDYVYSVVSLLEHALMDRDLVHRQIATWACKHLALGCFGFNREDALI
HLLNYVWPNIFETSPHLIQAVIDSIDGFRVALGPAIIFQYLVQGIFHPSRKVREIYWKIY
NNVYIGHQDSLVPIYPPFEKLNDSNFTRDELHYTL
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgaagagaaatgaactggacaggaaggacgtgtatagaaatttaaactacagc
aacgagaaactaaatggaggtgatattaaatatgtaaaggaaatagacccaatactgaat
gacgattatggagatagcttttcgaactataggagtaataataaggatgtaaatataagc
aagttaaaaaacgaaataatacaaaatgagttattaaataatgatgatataaatgatgta
agcttaggtttagtaaaagataaatccataaaaaaaagagaaaatgaatttcaaaaaaaa
aaatatgattatatattatcaccaggaagagcagatcctttttcggacaaaagcccttcc
cctgaggaaaggacttatgtagatgtaatgcaagaaatacataatgaggggaaaaggaac
aaaattattcatggtaaaaaaggtagtgcaagtggtactacaactaacgaaacgaggaaa
aaaaaattaaggtggggatatacagaaggagagcataccatcaataagacaaatggcgat
ggagtggatacatccatgtattatactggaatagctactattgccagtggtgatgctggg
agcaatgatactggctccgttactactggtaccgctgctactggtaccgctgctactggt
accgctgctactggccccacttcttctgaccccgttgctgcaaggcaaaagggggaaggc
agtggcttgaggaaagaaagtacgaagagcaaatgggattatgtagaagaggaaaatagt
ataaatttcgggagcatgccaaccccagcacccagcaagtgggtagacacaccatttata
ttaaatgatggtaatataaaaaaaaaaaaaatttcgagatgggataaaataggcgaaggc
agtgcagcagataatacaggcgccagtgatatgaagacaccaaagatagctatcctagat
gccaataatattaataagaacagaaataatattagtaataataacaatagtagtaataat
aataatgtgttgggtagtacgccatacataattacgaataataatggtacaatcattaat
acaccttatatgggtaatcatacgaacatgtttactcctatggctacgggtttgtcgtct
tcattacagggtgactcacttattaagatgaaaataaaaaatgaaatggatgttcgaaat
agacctttaacagatgaagatttaaatgaattgctaccttctgagggatacgaaattgtg
aagcctccagaggagtatgaaactttacggaaaaataaattaaaggccatgtttaaaagt
atggcgggaacacctctactcttaagtaataacagcgctgcaggaaggagcggcattatt
agcacgaaccaaatgctcagtgtgaacaacgttactgttagtagcagtggtgctactgat
accttccctggtaagaacgcaggattgcaaaatgacagcatgagtgcgattggcggtatt
gtaaacaacttggtgagtacaccttacgagagcaaagaaaaggagatggtacaaacccca
tatatgaataacaatatgcaaagtactcttattaacacgcccttctatgatatacctact
gttaataataaccaacaagaggaagaaacacattatagtaatattatgcaaaataaatat
ttcgagattaataatccacaggttttaagtgagttaaaatatatacaactaaaggatgaa
gattatatttattttaataaattatttcaaaatgtgaatgaagaagagctttcacaagac
gagttaaaagaaagaaagttcatgttattattattaaaaataaagaatggtactccatca
atacgtagaacagcattaagagctattacagaaaaggtaaaggagttaggaccagaaaca
ttatttaatttaatattaccattaatgatgcaaaatacgttagaagatcaagagaggcat
ttattagtaaaggtaattgatcgaattttatttaaactagacgatttagtaagaccatat
gtacataaaatattggttgttattgaacctttattaatagatgaagattattatgcaaga
gtagaaggtagagagattattagtaatttagccaaagcagcagggttagctacaatgata
ggtataatgagaccagatattgatcatccagatgaatatgttcgtaatacaacagcaaga
gcttttgctgttgttgcttcagcacttggaataccatctttgatattatttctaaaggct
gtttgtcaatctaagaagaactgggaagcaagacatacaggaattaaaatagttcaacag
atagctattttgatgggttgtgctgtacttcctcatttgaaacaattggttaatataata
gcacacggtttacatgatgaacagcaaaaggtacgaacaatcactgcattggcattagca
gcattagctgaggctgcagctccatatggtatagaagcatttgattctgtacttagacca
ctatggaaagggataacagaatatagaggtaaattacttgctgcctttttaaaagctata
ggattgatcataccgttaatggattcatatcatgcaaattattacacaagagaagtaatg
attatattaattaatgagttcaattcacccgatgaagaaatgaaaaaaattgtcttaaaa
tgtgttaagcaatgtatacagacagaaggaattgaaaaggattatattaatcaagaagtt
gttgaccctttttttgaaaaattttgggtaatgagaaatagtaatgataaaagaaatttt
aacttgattgtagaaacaaccgtcgaaattgctaacaaaattggaggtgctcttgttata
tcaagaattgttgatgacttaaaagatccatctgaacagtacaggaaaatggtaatgcaa
actattcagagcattattaataatttaggtgtagatgatatagatcagaaattagaggag
caattaatagatggaattttatatgcatttcaagaacaagcatcagatgattattatgtt
ttattaaattcatttgatgtgatagtaaacaaattaaagttaagaatgaaaccgtactta
ccacaaatagctggtataatcaggtggcgattaaatacaccattacctaaaataagacaa
cagagtgctgatctcatatcaagaattgcaaaattaataaaaatatgtggtgagcaacaa
atgttaggtcatctagctttatatctgtatgaatatttaggagaagaatatcctgaggta
ctgggtaatattattagagctcttaaatgtatagttgtagttttaggtgttcagaatatg
acgccacctataaaagatttactacctagaataacaccaattttaaaaaataggcatgaa
aaagtacaagaaaatgttattgacttgattggtattatagcagataagggaggtgattta
gtatctccaaaagaatgggatcgaatatgctttgacctaatagaattgttaaaatcgaat
aaaaaattaattagaagagcaactattcaaacttttggttatattgctagaactatagga
ccatttgaagttttaacagttttattaaataatttaagagttcaagaaagacaactaaga
gtatgtactacagttgcaatagcaattgtagctgatacttgtttaccttattctgtctta
gctgcattaatgaatgaatatagaactcaagatcttaatgtacagaatggagtattaaaa
gctttatcctttatgtttgaatatataggtgaaatagcaaaggattatgtatactcagta
gtttcattattagaacatgcattaatggatagagatctagttcacagacaaatagctaca
tgggcatgtaaacatttagcactaggttgctttgggtttaatcgtgaagatgctttaata
catttactaaattatgtatggcctaacatatttgaaacatccccacatctaattcaagct
gtcatagattctattgatggattcagagtagctttaggacctgctatcatttttcaatac
ctagttcaaggcatttttcacccatctcgtaaggttagagaaatttattggaaaatatat
aataatgtttatataggacaccaggatagtcttgttcccatctacccgccatttgaaaag
ttaaatgacagcaatttcacgcgcgatgaattgcactacacgttgtag
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integrated database retrieval system
