Plasmodium brasilianum: 92370764
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Entry
92370764 CDS
T10352
Symbol
MKS88_002676
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pbrs Plasmodium brasilianum
Pathway
pbrs03018
RNA degradation
pbrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92370764 (MKS88_002676)
09123 Folding, sorting and degradation
03018 RNA degradation
92370764 (MKS88_002676)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrs03019
]
92370764 (MKS88_002676)
03041 Spliceosome [BR:
pbrs03041
]
92370764 (MKS88_002676)
Messenger RNA biogenesis [BR:
pbrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92370764 (MKS88_002676)
mRNA degradation factors
5'-3' decay
Lsm complex
92370764 (MKS88_002676)
Spliceosome [BR:
pbrs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
92370764 (MKS88_002676)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF7957
SM-ATX
Motif
Other DBs
NCBI-GeneID:
92370764
NCBI-ProteinID:
XP_067073258
UniProt:
A0ACB9Y8X0
LinkDB
All DBs
Position
9:<234893..>236314
Genome browser
AA seq
126 aa
AA seq
DB search
MVFPLTLLKCSQNQAVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDRFWKISEC
YVRGNSVKYIRVQDQAIEQAIEETTEQKARNLGRGRGGRGRARGIGRGTDNRGRHGTQIR
RGGRGY
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggtgttccccttaacactgctaaaatgttctcagaaccaagcagtgatggttgagcta
aaaaatggagaaacgtacagtggctttttggttttttgtgatcgcttcatgaacttacat
atgaaaaatataatttgcacatcaaaagatggtgatagattttggaagatttcagaatgt
tatgtcagagggaatagtgtaaaatatattcgagttcaagatcaagccatcgaacaagcc
attgaagaaacaacggagcaaaaggcaaggaacttgggcagaggaagaggcggaagagga
agagcacgcggaattggcagaggtacagataacagaggtcggcatggaacgcaaattaga
aggggaggaaggggctactag
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