Plasmodium brasilianum: 92371267
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Entry
92371267 CDS
T10352
Symbol
MKS88_003180
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pbrs Plasmodium brasilianum
Brite
KEGG Orthology (KO) [BR:
pbrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbrs03041
]
92371267 (MKS88_003180)
03016 Transfer RNA biogenesis [BR:
pbrs03016
]
92371267 (MKS88_003180)
Enzymes [BR:
pbrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92371267 (MKS88_003180)
Spliceosome [BR:
pbrs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
92371267 (MKS88_003180)
Transfer RNA biogenesis [BR:
pbrs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
92371267 (MKS88_003180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
92371267
NCBI-ProteinID:
XP_067072916
LinkDB
All DBs
Position
10:complement(<575483..>578002)
Genome browser
AA seq
839 aa
AA seq
DB search
MSAFEELGLDSTLCELLETNGIDLPTAIQQESIPLILGGGDLCACAETGTGKTLSFIVSS
LQIVHELLRNIGTYEINSSDYNNGNKENIHHKSLKEDDKNGNKELIIRSLNNSNSKVRIM
EDTNECILLSTSNNSNYFEEIKVECEIVNGLYAFEVEILQRSFINIGFCPSLVKETSRYN
YTYCSNGCKYTNNRQENYGDFFSTNDIITCLINKNSNIIAFKKNGKFLGNAFKIFYKYND
IPFFPYVCGKYFHIKFHFKNLKYVDSSLYKELNDIINTRKEDSDCRRTIYLDMSTDGNRR
ESEVQYDHGNRNTNNRSICGSSTNDGGITNISISNNTSKKVNIDETNKNKLYCIVLVPTR
DLAMQTYNNYLIYAQCFSGCSINVGLLVGGGPPMKEKRNSAYNIVVCTCFKLMEYLKKNN
INVNDVRLLILDEADELINTDEKSVLEIKDVCMRNSQHVQTCFFSATLQDKNVKDCINKI
TNKPLFVDLKYGKNYIPSHIYVCIYYVNDQNSSINSNLSCKGGSIEEKTYEDIIYNEKLN
SMNNKALYEYTDKVHLLNCNRDGKEMISLDIKINKLKKLIHIINVFNMQNGIIFCRTNLD
CDNVYNFLNFVGDGKAYKGTVESLKENKYSCVILKGKMSNEERKNNLNAFKKGEVRFLIC
TDVAARGIDIQNLRYLIIMTLSDNINTFFHKIGRVGRDGKNSLCIVLSAQNQEEKVWFHT
CPSRGQNCNNRNLKEYQGCTVYIKESDYIQTINNMLEIPMHVLDSKYYYAENVVDPLNYF
KSNPTSNKSRRNKNQNVNSIFSEPANASVLNCFSSSIHNIQKLQSAISYKHYELSNFII
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttttgaagaactaggtttagatagcactttatgcgagttgttagaaacaaat
gggatagatttgccaacagctattcagcaagaatcaattcctttgattttaggtggagga
gatttgtgtgcatgtgccgaaacgggtacaggaaaaacgctaagtttcattgtgtcctca
ttacaaattgtacacgaattattgagaaacattggcacgtatgaaataaatagtagtgat
tacaataatgggaataaggaaaatattcatcataaaagtttgaaggaggatgataaaaat
ggtaataaggaattaataataaggtctttaaacaatagtaattctaaggttagaattatg
gaggatacaaatgaatgtatattattaagtactagcaataattcgaactattttgaagag
ataaaagtggagtgtgaaattgtaaatggactatatgcttttgaagtagaaattttgcaa
agaagttttattaacattggtttttgtccatcattagtaaaagaaacgtcaagatataat
tatacttattgtagcaatgggtgtaagtatactaataacaggcaagaaaactatggagat
tttttttctaccaatgatataattacatgtttaataaacaaaaattcaaatattattgct
tttaaaaagaatgggaaattcttaggaaatgctttcaaaatattttataaatacaatgat
ataccattttttccatatgtatgtggaaaatacttccatataaaatttcattttaaaaat
ttaaaatatgtagactcctccttgtacaaagaattaaacgatattataaatacaagaaaa
gaagatagtgactgcagaaggacaatatatcttgacatgtcaacagatggaaataggagg
gagagtgaggttcagtatgatcatggtaatagaaatacaaataatagaagcatttgtggt
agtagtactaatgatggtggtattaccaatataagtatcagtaataacacgagtaagaag
gtaaatattgatgaaacaaataaaaacaaactgtactgcatagtattagtcccaacgaga
gatttagcaatgcaaacgtataataactatttgatctatgcccaatgctttagtggttgt
tctataaatgtaggattactagttggaggaggaccacctatgaaggaaaaaagaaattct
gcgtataatattgttgtatgtacttgttttaaactaatggaatatttaaaaaaaaataac
atcaatgtgaatgacgtaagattattaattttagacgaagcagatgaacttataaatacg
gatgaaaagtctgttttggaaataaaagatgtttgcatgaggaacagtcaacatgtacaa
acctgcttcttctcagcaacattacaagacaagaatgtaaaagattgcataaataaaatt
accaacaaaccattatttgttgatttaaaatatggaaaaaattatatcccctcacatatt
tatgtttgcatctattacgtaaatgatcaaaattctagcattaattcgaacctttcttgt
aaagggggaagcatcgaagaaaagacgtatgaggacataatttataatgaaaaacttaat
agtatgaataacaaagcattgtatgaatatacagataaggtgcatttgctaaattgcaac
agagatggaaaagaaatgatatcattagacattaaaattaataagttaaaaaaattaatt
catataattaacgtatttaatatgcaaaatggtattatattttgccgaaccaatttagat
tgtgataatgtgtacaattttttaaattttgttggtgatggaaaagcatataaaggaaca
gttgaatcacttaaggaaaataaatattcctgtgttattttaaaagggaaaatgtcaaat
gaagaaagaaaaaataatttgaatgcttttaaaaaaggagaagtccgttttttaatatgt
actgatgtagcagcaaggggaattgatattcaaaatttgagatatttaattattatgact
ttgtcagataatattaatacattttttcacaaaattggaagagtaggtagagatggaaaa
aatagcttatgtattgttttaagtgcacaaaatcaagaagaaaaagtatggtttcataca
tgtccaagtagaggacaaaattgtaataacagaaatttgaaagagtatcaaggatgtact
gtttatataaaagaaagtgattatattcaaactataaacaatatgttagaaatcccaatg
catgtacttgattcgaaatattattatgcagaaaatgtagtagaccctttaaattatttt
aagagtaacccaacatctaataaaagtagaagaaataaaaatcaaaacgtaaactccatt
ttttccgagcccgcaaatgcaagtgtgctaaactgcttcagttccagcattcacaatatt
cagaaattgcaaagtgcaataagttacaaacattatgagttgtccaactttataatatga
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